Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1618g0001 ATGGGTGCGGCTACTACCTGTCATCCGCCGCCACCGCGAGCGGATGAGACGGCTGTGTTGCCTCTGAATTCGCTGCCTCTGGGTTTCAGATTTCGGCCCACCGACGAGGAGCTTGTTGATTTTTACCTGAGACAGAAGATTAATGGTTATGGTGACGAAGTCTGGGTTATCCGGGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCGAATGGCCATAGATTGAACCGAGCAACAAATCAAGGGTATTGGAAGGCAACTGGCAAGGATCGCAAAATTAAGTCCGGGTCCACGTTGATAGGAATGAAGAAGACTTTAGTCTTCTACAGTGGTCGTGCTCCCAAGGGGAAGAGAACCCATTGGGTTATGCATGAGTACCGTCCCACTCTGAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTCTGTCGTTTGTTTAAGAAACAAGATGAGAGTCTTGAAGTTTCAAACTGTGAAGAAGTGGAACGGACTGTGTCAACCCCTACTGCTGCTAATTACTCTCCAGAAGAAATACAGTCTGATGCTGGTGTGGCTGTGGTATCCCCGTCGGTGGCTCCAGAAGATGATAAGCAGCGGATAGCTCCATTCTGTATTTCTGAGAACACTGAAGAAACCACATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGGGGTGATGCTTGTGACGCACAAAATCAAAATGTAGATAAAACAGCTATAGAGGAGGATCCGCTGTTGAACCTTGATATATTTAATGAACCAATAACTGGATTTGATGACAAGATGTTCTCCCCGTTACATATGCATGTGCTGTCAGAATTTTATGATCCAGTGAGCAATGTATCAGATGGCTATTCTGGGGTGCAACTTTCATATGGCACAAATGAGACAAATTTTTCAGAGTACTTTGACTCATGCATTAATTATGGCGGGTTGTCCTGTGAGGACTACATCAGTCAAAAGCCAACCTCTGGCGTTTTAAATCCTAGGGACTATGGATCTGGCAATGACTCAGATGTGCAAATGGCCAATATGCCGTATCGTCAAGCATTGCATGCTGTGCATCCTGAGGAGGCAATTGAGAACAGGATTCCTTCCATGATAGATACAGCTTCAGAATTTACCAGAGCCATTACGCCTGACCTCAGTGGTTTTGACCAGAAGAGCAATATTGGGATAGTCCAAAGCCATTCTCAGATGGCTTTGCCATCTGATGTTGCTTTTGACCAAGTCTACAGTGTGTTAAATGGTTGTCAGGAACCAAGAAACTACAATACAGTTGTTGGCGGTGATAATGGTGCTGGGACTGGGATCAGGATTAGGACTCGCCAAGGGCGAAATGAAGAGGTAAACATGAACCCTATGATCCAAGGGCAGGGTAATGCTCCCAGAAGAATTCTTCTACTTAAAATTGAGAAAGGTGGGGGTTATGTACAAGAAAACCATGATTCAAAACCAATCATCACAAGGGAGACTGAAGCCTCAGAAAATAATGCTGCAGAAGAGGATGCTAATGCTGAGAGTGAACCCCAGACTCCTGAGTCAGTTGACAGTAATAATATTTCTCAGCAACTTGTTACAAATGAAGATTCTATCTCAGGTTTAAAAGAAACCATGTTGTGCAAATCAGTTAAGGGCACATCAAAGGTTTCTTCTCGTGCCAGGATCCGGTCATCTACCTTGGTATTCTCTGTCAGTTTAATGGCTGCAGTAGTATTCATAGCTAACATATGGGGAGTTATTAAATTTTGA 1839 0.4459 MGAATTCHPPPPRADETAVLPLNSLPLGFRFRPTDEELVDFYLRQKINGYGDEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNQGYWKATGKDRKIKSGSTLIGMKKTLVFYSGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCEEVERTVSTPTAANYSPEEIQSDAGVAVVSPSVAPEDDKQRIAPFCISENTEETTSNVITSADCHSDGGDACDAQNQNVDKTAIEEDPLLNLDIFNEPITGFDDKMFSPLHMHVLSEFYDPVSNVSDGYSGVQLSYGTNETNFSEYFDSCINYGGLSCEDYISQKPTSGVLNPRDYGSGNDSDVQMANMPYRQALHAVHPEEAIENRIPSMIDTASEFTRAITPDLSGFDQKSNIGIVQSHSQMALPSDVAFDQVYSVLNGCQEPRNYNTVVGGDNGAGTGIRIRTRQGRNEEVNMNPMIQGQGNAPRRILLLKIEKGGGYVQENHDSKPIITRETEASENNAAEEDANAESEPQTPESVDSNNISQQLVTNEDSISGLKETMLCKSVKGTSKVSSRARIRSSTLVFSVSLMAAVVFIANIWGVIKF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1618g0001 612 SUPERFAMILY NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
Prci1618g0001 612 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 237 - -
Prci1618g0001 612 MobiDBLite consensus disorder prediction 533 556 - -
Prci1618g0001 612 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Prci1618g0001 612 MobiDBLite consensus disorder prediction 521 556 - -
Prci1618g0001 612 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Prci1618g0001 612 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Prci1618g0001 612 FunFam Nac domain-containing protein 86 34 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1618g0001 18 497 NAC Transcription Factor Family AT4G35580 40.984 7.62e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1618g0001 NAM 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1618g0001 - - gmx:100778903 624.394