Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1612g0001 ATGGCTGAATCGGCCTCCGCCGCCCCCCGCAGAATGTGGTGCTCAGTCCCGGAGCGTCTCCAACTGCACGCCGCCATGTTGGCCTTGCAGTTCGGTTACGCCGGCTTCCATGTCGTCTCCAGAGCTGCCCTTAACATGGGCATTAGCAAGCTTGTTTTCCCTGTCTACCGCAACATCATTGCTCTGCTTCTCCTTCTTCCCTTCGCTTACTTCATGGAAAAGAAGGATAGGCCTGGGCTTACCCTTAACTTTCTCCTACAGTTTTTTCTTCTGGCTCTCGTCGGGATTACAGCCAACCAAGGGTTCTACTTGCTTGGGTTGGACAACACGTCGCCAACCTTTGCATCGGCTATACAGAACTCTGTCCCGGCCATCACTTTTCTGATGGCAGCCGTACTGAGGATAGAGCAGGTGAGGCTTAACCGAAAAGATGGGGTGGCCAAGGTGATCGGAACCTTGTTCTGTGTTGTCGGTGCCACCGTGATTACCCTATACAAGGGTCCTACCATATACAGCCCGTCTCCCCCGCTGCACAGTACCTCCACGTCCGCATTCAAGCCCCTATTTCCCTCGCTCGGGGATGCAAAGGCAAAAAACTGGACCCTCGGCTGCATCTTCCTCATCGGACACTGCTTGTCCTGGTCTGGCTGGCTAGTCTTGCAAGCACCAGTTCTCAAGAAGTACCCCGCTCGCCTTTCCGTCACATCTTTCACTTGTTTCTTTGGACTCATCCAGTTTCTGGTTATTGCCCTCATCTTCGAGAGAGACTCGCAGGCTTGGGTTTTTCACTCTGGCGGAGAAGTTTTCACAATCGTATACGCGGGAGTGGTGGCATCAGGAATAGCCTTCGCTGTACAGATATGGTGCATTGACAGGGGTGGCCCTGTGTTCGTAGCAGTGTATCAACCGGTTCAAACTCTCGTTGTCGCTATCATGGCTTCCGTCGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATAGGGGCCATAATGATCGTAGCGGGATTATACTTGGTGCTGTGGGGTAAAAGCGAAGAAAAGAAGTTCGCGAAGGAACTTCTCGCGAACGCGTCCTCGGCAGAGCACGGCGGCACCGCCAGGCCGGCAAGCCACTCCAAGACCTCCCTCACTCAGCCACTTCTTCCTTCGTCTACGGATAATGTCTGA 1167 0.5381 MAESASAAPRRMWCSVPERLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFMEKKDRPGLTLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRIEQVRLNRKDGVAKVIGTLFCVVGATVITLYKGPTIYSPSPPLHSTSTSAFKPLFPSLGDAKAKNWTLGCIFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLVIALIFERDSQAWVFHSGGEVFTIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASVALGEEFYLGGIIGAIMIVAGLYLVLWGKSEEKKFAKELLANASSAEHGGTARPASHSKTSLTQPLLPSSTDNV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1612g0001 388 MobiDBLite consensus disorder prediction 363 388 - -
Prci1612g0001 388 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Prci1612g0001 388 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020
Prci1612g0001 388 MobiDBLite consensus disorder prediction 361 388 - -
Prci1612g0001 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 344 - -
Prci1612g0001 388 PANTHER WAT1-RELATED PROTEIN 24 355 IPR030184 GO:0016020|GO:0022857
Prci1612g0001 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1612g0001 10 388 Nodulin-like Gene Family AT1G75500 76.963 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1612g0001 - - gmx:100798686 631.328