Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1606g0001 ATGGCTGTGTTTGCTTCTGCTTCTTCTTCCCGAGTGAAATATGATGTTTTCATCAGCTTTCGAGGTTCAGACATCAGATCTGGTTTCCTCAGCCATTTAACAAAGGAGCTGCGTCGAAAGCAGGTAGACGTCTATGTGGATGACAGGCTGGAGAGAGGAGATCAAATATCGTCTGCACTTGACGAAGCCATAGAAGGATCAATGATTGCGTTGGTCATATTCTCCAAAGATTATGCTTCTTCAAAGTGGTGCTTGCAAGAGCTTGTCAAAATCATGGAATGTAAGGAAGCAAGCGGACAAATTGTGTTACCAGTTTTCTATTGTGTAGATCCTTCAGATGTCAGGCGTCAAAAACGAACTTATGCAGATGCATTTGCACATCTTGAACTGAAGTTCAAGGATAACTCAAACGAGTTGAAAAATTGGAGATCTGTCTTGAAGAAAACCGCAGACTTATCTGGTTATCATTCATCAAATTTTCAAAACGAATCACAGCTCATTGATGCAATACTCCAAGATGTCCTAAAAAAATTGGAAGATAACAACCCGGTTGCGCCACAATCCCATCTAGTTGGATTGGATCAAAATCTCGCCATTGTTGAATCATTAATGAAAATTACGTCACAGGAAGTTCTACTTCTTGGTATTTGGGGTGTTGGTGGGATAGGCAAAACAACCCTGGCTCGAGCTACATTTGACAAATTCTCTTCTCAATTTGAAAGCTATTGCTTCATAGAAAATGTGAGAGAGGAATCAACGAAGAGCAATGGTTTGAGTCATTTGCGTCAAAAGCTTCTTTCTAAGCTATTAGACCAAGATGCAGGTCTCCCCATAGATATGAATTATGCAAGGAGAAGGCTATCACGAAAAAGAGTCTTGATTGTGCTTGATGATGTATCCAATTCAAAGCAATTAAAAGATCTAGCTGGACAACAACTTTGCTTGGGGCGTGGCAGCAGAGTAATTGTAACAAGTAGAGACAAGCATGTTTTTAGGATTGGAGGGATTCATGATGAATATATACATGAAGTCAAGGAGTTGAATTTTGAAGAATCACTAAAACTTTTTAGTTTACATGCCTTCAAGCAAACTCACCCTAATGTGGGATATGAAAGGCTATCAGAAATGACAGTTGCCTATGCTAAAGGCATTCCTCTAGCTTTAGAAGTTTTGGGTTCCCATTTTCATTCTAGAGATAAGGCATACTGGGAGAGTGAGCTTGAGAAACTTAGAAAGTGTCCCCATCCAGAAATTCAAAATATATTGAAAGTTAGTTATGATGGATTAGATGACATGGATAAGGAAATATTTTTAGACATTGCATTTTTTTTCATTGGAGAAGAAAAAGATAGAGTTATTCATGTGCTAGAAGCTTGTGGTTTTAAAGCAGTTAGTGGAATACAAAATCTCATGGATAAATCTCTCATAAAACCAGGTTGGCTGAATGGTAAAAGTACTGAAATGCATGATTTGATACGAGAAATGGCTAAGCAAATAGTTCGTGCGGAATGTATTAAAGATCCTGCATTACGTAGCCGATTAAAAGATACAGATGAAATTTATAATGTATTAGAAAGTAACATGGGAACTAATAAAATTGAAGGCATCATATTGGATTTGGATCAAATCAAACATTTACAATTGGACCCAGACACCTTTGCAAAGATGAAAAATTTAAGATTTCTCAAAATTTTTCACCCTAAACCACGGATGATTGAGCACAAGACATATCATCATATAGAGCTTCCTTTTGGTCTGGGCTCTTTTCCAAAGAAATTAAGGTATTTTTATTGGGAACAATATCCACTGAAGTCTTTGCCGTTGGGCTTTAATGGTAAGAACCTTGTTGTACTTCATATGACAGACAGCAATATTAAAGAGCTTTGGGATGGAGTGCAGGATCTTGTGAATCTAAAGACATTAAATTTGTTTAGGTGTAAACAATTGGTTGAGCTGCCTAATTTCTCTATGGCATATAATCTTGAAGAAGTCAATCTCTGGATGTGTGAAAGTCTACATAGTATTCATCCATCTATTTTATCTCTCCAATCTCTTGTTAGATTGAATGTTTGTTTTTGTCGGGAATTAGAAAGTCTTGAAAGTGAGACTCATTTAGAATCTCTCTCTTACCTTGATTTTGGCTTTTGTAAGAGCCTCCGGAAATTCAGTTTGTCATCAAAGAAATTGGGGAGTTTGTATTTCAGTGAGACTGAAGTTGAAATATTGCATTTGCTGCCAATGGGAGGTTTCACGGAGCTCAAAATCCTTGTGATTTATAAGGGTGAAAGATTAAGGAGTCTTCCGATAAGTGAGCTATGTGGCTTGACAAATCTTGAGAAATTTAGAATTTTGAATTTCCAACAGGTGATCCACACAACAGAGCTGCGCTCTCTTTTTGATGCTTGGCGTAATTTAAAAGACCTAAGTTTGGAAAGATGCAGTTACTTGCTGGAAATCCCTGACAATATCAAGGCCTTAACAAGCTTGAAAATCATGATCTTGAAAGACTGCGAGAGGCTTAAGTCTATACTTGGACTTCCTCCCTTCCTTAAAGTATTATATGCTGGAGGATGCACTTCATTAGAGATTGTATTCTCTGATTCTCTAGTTCAAAATCAGTGTCAATTTCATTTCGATGATTGTATAAAGTTGGATGAGTGTTCTCTTCGCTTCATTGAGAAACTAACTCATTTCTCTTTGACTTCAGCCTGTGAGGATAAGAAGCTTCGTTTTGTTTGGGCTTGTTACCCCGAAAGCAGAGTTCCAAAATGGATGGAATATAAACATCAGATAGAGGCTTCCAATGCTATGGAAGTCATCTGCAATCTCAAACGATCACCCATCATATTGTGTTGCTGCATTGTTCCTTCTCATCTTTGCTCACCTAAAATGTTGACGATCTACTGTGATTTCTCTTATGATGATGACAACAAATTCCGCAGTTCATTTTTTGCTTCCTCCCTCCTTAAAATGAATTCGGATTGTGTTTGCATATGGCACATGGAATTGGAAAGGGATTCGTTTGGTGCTGGAGCAGGTGATGTTGCCAAGATTTCATGTGAATTCTCTGCGGACTATTACGTTGATTTTGATCATGGAGAGGTAGAGACAGTTCCAATGAAAGCATGTGGAGTGCACGTGACATATAACTCACAGTCAGACTCGGATGAAGAGCGACTCCCTCCAACAAATCTCATGACGACTTCACCTGTCACCCCTTGCAACTAA 3228 0.3817 MAVFASASSSRVKYDVFISFRGSDIRSGFLSHLTKELRRKQVDVYVDDRLERGDQISSALDEAIEGSMIALVIFSKDYASSKWCLQELVKIMECKEASGQIVLPVFYCVDPSDVRRQKRTYADAFAHLELKFKDNSNELKNWRSVLKKTADLSGYHSSNFQNESQLIDAILQDVLKKLEDNNPVAPQSHLVGLDQNLAIVESLMKITSQEVLLLGIWGVGGIGKTTLARATFDKFSSQFESYCFIENVREESTKSNGLSHLRQKLLSKLLDQDAGLPIDMNYARRRLSRKRVLIVLDDVSNSKQLKDLAGQQLCLGRGSRVIVTSRDKHVFRIGGIHDEYIHEVKELNFEESLKLFSLHAFKQTHPNVGYERLSEMTVAYAKGIPLALEVLGSHFHSRDKAYWESELEKLRKCPHPEIQNILKVSYDGLDDMDKEIFLDIAFFFIGEEKDRVIHVLEACGFKAVSGIQNLMDKSLIKPGWLNGKSTEMHDLIREMAKQIVRAECIKDPALRSRLKDTDEIYNVLESNMGTNKIEGIILDLDQIKHLQLDPDTFAKMKNLRFLKIFHPKPRMIEHKTYHHIELPFGLGSFPKKLRYFYWEQYPLKSLPLGFNGKNLVVLHMTDSNIKELWDGVQDLVNLKTLNLFRCKQLVELPNFSMAYNLEEVNLWMCESLHSIHPSILSLQSLVRLNVCFCRELESLESETHLESLSYLDFGFCKSLRKFSLSSKKLGSLYFSETEVEILHLLPMGGFTELKILVIYKGERLRSLPISELCGLTNLEKFRILNFQQVIHTTELRSLFDAWRNLKDLSLERCSYLLEIPDNIKALTSLKIMILKDCERLKSILGLPPFLKVLYAGGCTSLEIVFSDSLVQNQCQFHFDDCIKLDECSLRFIEKLTHFSLTSACEDKKLRFVWACYPESRVPKWMEYKHQIEASNAMEVICNLKRSPIILCCCIVPSHLCSPKMLTIYCDFSYDDDNKFRSSFFASSLLKMNSDCVCIWHMELERDSFGAGAGDVAKISCEFSADYYVDFDHGEVETVPMKACGVHVTYNSQSDSDEERLPPTNLMTTSPVTPCN 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1606g0001 1075 Pfam NB-ARC domain 198 416 IPR002182 GO:0043531
Prci1606g0001 1075 Gene3D Ribonuclease Inhibitor 512 727 IPR032675 -
Prci1606g0001 1075 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Prci1606g0001 1075 SUPERFAMILY L domain-like 537 891 - -
Prci1606g0001 1075 Gene3D Ribonuclease Inhibitor 728 874 IPR032675 -
Prci1606g0001 1075 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Prci1606g0001 1075 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 155 IPR035897 -
Prci1606g0001 1075 SUPERFAMILY "Winged helix" DNA-binding domain 417 504 IPR036390 -
Prci1606g0001 1075 PRINTS Disease resistance protein signature 381 395 - -
Prci1606g0001 1075 PRINTS Disease resistance protein signature 633 649 - -
Prci1606g0001 1075 PRINTS Disease resistance protein signature 213 228 - -
Prci1606g0001 1075 PRINTS Disease resistance protein signature 286 300 - -
Prci1606g0001 1075 SMART till_3 13 152 IPR000157 GO:0007165
Prci1606g0001 1075 MobiDBLite consensus disorder prediction 1052 1075 - -
Prci1606g0001 1075 Pfam TIR domain 13 184 IPR000157 GO:0007165
Prci1606g0001 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 440 IPR027417 -
Prci1606g0001 1075 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 725 IPR044974 GO:0006952
Prci1606g0001 1075 Gene3D - 177 335 IPR027417 -
Prci1606g0001 1075 Gene3D - 346 430 IPR042197 -
Prci1606g0001 1075 Gene3D - 10 176 IPR035897 -
Prci1606g0001 1075 Pfam Leucine Rich Repeat 614 633 IPR011713 -
Prci1606g0001 1075 FunFam Disease resistance protein (TIR-NBS-LRR class) 348 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1606g0001 9 847 WRKY Transcription Factor Family AT4G12020 32.084 1.13e-100 348