Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1022 ATGCACATACATAGAAATAAAACAAGCACGCAAGACTCGTCCCAATTTAAGAGCCAGACCTTACCGCATCCACCTTTAATTTTCTTTTCAAAGCGCGAGCGCGCGCACAGGCACAGAGATTGCAGTATGTTTGCCGAAGAGAATGGTCTTAAGGGAGACCCAAGGCTGCAAGCCATATCTCAGGCCATTAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATTACGACATTGTTGTTGGATCACAAGGCCTTCAAAGACACGGTCGACATTTTTGTCGATCGTTACAGGGACATGCACATTTCCGTTGTTGCCGGAGTGGAAGCAAGAGGATTCATGTTTGGTCCACCGATTGCGCTGGGCATTGGCGCAAAGTTTGTTCCTTTACGCAAACCTCGAAAACTTCCCGGTGAGGTGATCTCAGAGAAATACGAGCTAGAATATGGAACTGATTGCCTGGAGTTGCATGTTGGGGCTGTCCAGCCTGGTGAACGGACCTTAATTATTGATGATATGGTGGCCACCGGTGGAACTCTCTCAGCCGCAATAATGCTTCTGGAACGTGCTGGTGCTGAAGTGGTTGAGTGTGCTTGTGTCATTGGTGTGCCTGAGGTGAAGGGACATTGCAGGCTTAATGGGAAACCATTATATGTGCTTGTGGAGCCACGTGAAATAGATGATTGTTTGAGATGTGATTGCAGTTCTGTTTCTGCTGACGTAAAAAAGGATGAGTGTTTGAGGAGAAAGGTGATGATGTGCTCCTCCTACCAGTTCTCACCTGAATGGACTGCCAATTGA 810 0.4716 MHIHRNKTSTQDSSQFKSQTLPHPPLIFFSKRERAHRHRDCSMFAEENGLKGDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGVEARGFMFGPPIALGIGAKFVPLRKPRKLPGEVISEKYELEYGTDCLELHVGAVQPGERTLIIDDMVATGGTLSAAIMLLERAGAEVVECACVIGVPEVKGHCRLNGKPLYVLVEPREIDDCLRCDCSSVSADVKKDECLRRKVMMCSSYQFSPEWTAN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1022 269 Hamap Adenine phosphoribosyltransferase [apt]. 59 226 IPR005764 GO:0003999|GO:0005737|GO:0006168
Prci15g1022 269 MobiDBLite consensus disorder prediction 1 22 - -
Prci15g1022 269 CDD PRTases_typeI 93 225 IPR000836 -
Prci15g1022 269 Gene3D - 48 226 IPR029057 -
Prci15g1022 269 FunFam Adenine phosphoribosyltransferase 1 47 226 - -
Prci15g1022 269 Pfam Phosphoribosyl transferase domain 85 208 IPR000836 -
Prci15g1022 269 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 51 227 - -
Prci15g1022 269 NCBIfam adenine phosphoribosyltransferase 60 224 IPR005764 GO:0003999|GO:0005737|GO:0006168
Prci15g1022 269 SUPERFAMILY PRTase-like 62 220 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1022 Prci-Chr15 6342847 6345581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g1022 53 225 PRT Gene Family AT1G27450 71.098 1.58e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1022 K00759 - gmx:100499904 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1040 2 7616443 7619528 Prci15g1022 15 6342847 6345581 CCT
Prci15g1022 15 6342847 6345581 Prci15g1022 15 6342847 6345581 ECH
Prci15g1022 15 6342847 6345581 Prci2g1040 2 7616443 7619528 ECH