Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1006 ATGTTGCATTTACTGCACGGGACGCTTCAAGTGATCATATATGAAGTCGATAAGCTACATTCTGGACACAACTTCAATCTCAACAACCAGGGTGCAAGAAATTTTGGGAAGAAAGTTCTTACCCGAGTCAAGAGTATTTTGCGATCCAAACCTCAAATAATTGGGACTAGATTGTATGCAACAGTTGATTTAGATAAAGCAAGGGTTGGGAGAACAAGAATGATACGCCAAGTCTCTAAACCTAAATGGAACGAGACATTTCATATATATTGTGCCCATTCCATTTTTGAGATTATATTCACTCTTAAATATGATAATCCTGTTGGGGCAACTCTTATTGGAAGAGCTCATGTACCTGTTGAGCAAATCCTCAAAGGCAATATAATGGATACTTGGGTTGCTATAACCGACGAAGATCGTCGTCCCATACAGGGTGGCTCTAAAATACATGTTAGAATGCAATTCTTTAATGTTACTATGGATGTAACTTGGTCTAAAGGAATCAAGAGCCCGCGAAATGCAGGTGTTCCTCGTGCATTCTTTGCCCAAAAAGTTGGCTGCAAAGTTACTTTTTACCAAGATGCTCATATCTTAAATGCTTATCTTCCAAGGATTCCTCTGTCCGAAGGAAGATGTTATGAGCCCTATAGATGTTGGGAGGACATTTTCAATGCAATCACAAATGCTAAGCACTTGGTTTACATAACTGGATGGTCTATATATACTAAAATAACCTTAGTAAGAGATCTAAGGAGGCCAATTTCTGGGGGAAATATGACCCTTGGGGAACTTCTTAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTGATGCTTGTGTGGGATGACAGAACTTCTATTAAAGAGATAAAGAAAGATGGGTTGATGGCAACTCATGATCAAGAAACACAAGAGTATTTTAAGAACACTAAAGTGCAATGTGTGTTGTGTCCACGTAACCCAGATGATGGACGTAGCATAATTCAAGGTTTTGAGATCTCAACAATGTTCACTCATCATCAAAAGACAGTGATTGTTGATAGTGAAGTACCTGGCGGAGGATTTGATAGTAGGCGAAGGATAGTAAGTTTTATTGGTGGTATTGATCTGTGTGATGGGAGGTATGATACTCAAGAACATCCTTTATTTTCAACTCTCAACACAACCCATTATAATGATTTCCACCAACCTAACTTTCCTGGAGCTTCAATCAAGAAAGGAGGCCCAAGAGAGCCGTGGCATGATATTCACTGCAAATTAGAAGGGCCAGTGGCTTGGGATGTCTTATTCAACTTTCAACAAAGGTGGGAGAAGCAAGTTGGTAAGAAATTCTTACTCCCTCCTAAACTTCTTGATCGGATTCTAGTACCTCAATTTTCCATAACAACAAATGATAGACATACATGGACTGTTCAATTATTCAGATCTATTGATAGTGGTGCAGCTTCTGGCTTTCCTCAAGACCCATCTAAAGTAATTGAATTAGGCCTTGTCAGTGGGAAAGATAACATCATTGATAGAAGTGTTCAGGATGCTTATATAAATGCAATTAGACGAGCCAAGAACTTCATCTACATTGAAAACCAATATTTCTTAGGGAGTTCATATGGTTGGAAAGAGTGTGACATAAAAGTTGAAGATATTGGGGCTCTACATCTTATACCAAAGGAGTTGTCCCTGAAGATCATAAGCAAGATTGAAGTAGGAGAAAGGTTTTCAGTGTACATTGTGATTCCAATGTGGCCAGAAGGTGTCCCTGAGAGTGATTCAGTACAAGCAATATTAGATTGGCAGAGAAGGACAATGGAGATGATGTATATTGATATTGCTGTAGCCATTCAGAGAAAGGGAATTAAAGCCCACCCTAGAGATTACTTGACATTTTTCTGCCTTGGAAATCGAGAGAGTAAGAAAAATGGTGAATATGTTCCTCCAGAGAGACCAGATCCTGATAGTAATTATAGCAAGGCACAAAATGCTAGGCGCTTTATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGAGATAGTGAGATTGCAATGGGTGCATTCCAACCATATCACCTTGCATCCTATGGCCCACCTAGAGGTCAGATATATGGATTTAGACGAGCTTTATGGTACGAGCACCTTGGGAATAATCCTAAAGGTGATGAAGCGTTTGACCATCCAGAAAGTGAAGATTGTGTGAAGCTTGTGAATTATCTTTCAGATTTGAACTGGGAAAATTACTCAAGTCAAACATTTGATCCACGAAGTTCATTCAACCACCTTATGCGTTACCCTATAGATATAACTAGAGATGGGAATGTAACACAATTACAAGAGTTTGAATTCTTTCCCGACACTAATGCTTCAGTTTTAGGTTCTAAATCAAGCCTTCCTCCAATGCTCACCACCTAA 2460 0.3902 MLHLLHGTLQVIIYEVDKLHSGHNFNLNNQGARNFGKKVLTRVKSILRSKPQIIGTRLYATVDLDKARVGRTRMIRQVSKPKWNETFHIYCAHSIFEIIFTLKYDNPVGATLIGRAHVPVEQILKGNIMDTWVAITDEDRRPIQGGSKIHVRMQFFNVTMDVTWSKGIKSPRNAGVPRAFFAQKVGCKVTFYQDAHILNAYLPRIPLSEGRCYEPYRCWEDIFNAITNAKHLVYITGWSIYTKITLVRDLRRPISGGNMTLGELLKKKADEGVNVLMLVWDDRTSIKEIKKDGLMATHDQETQEYFKNTKVQCVLCPRNPDDGRSIIQGFEISTMFTHHQKTVIVDSEVPGGGFDSRRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTTHYNDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLFNFQQRWEKQVGKKFLLPPKLLDRILVPQFSITTNDRHTWTVQLFRSIDSGAASGFPQDPSKVIELGLVSGKDNIIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWKECDIKVEDIGALHLIPKELSLKIISKIEVGERFSVYIVIPMWPEGVPESDSVQAILDWQRRTMEMMYIDIAVAIQRKGIKAHPRDYLTFFCLGNRESKKNGEYVPPERPDPDSNYSKAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASYGPPRGQIYGFRRALWYEHLGNNPKGDEAFDHPESEDCVKLVNYLSDLNWENYSSQTFDPRSSFNHLMRYPIDITRDGNVTQLQEFEFFPDTNASVLGSKSSLPPMLTT 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1006 819 ProSiteProfiles C2 domain profile. 1 133 IPR000008 -
Prci15g1006 819 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 662 689 IPR001736 GO:0003824
Prci15g1006 819 FunFam Phospholipase D 475 708 - -
Prci15g1006 819 PANTHER PHOSPHOLIPASE D 3 809 IPR015679 -
Prci15g1006 819 SUPERFAMILY Phospholipase D/nuclease 508 736 - -
Prci15g1006 819 PIRSF PLD_plant 1 819 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci15g1006 819 Pfam Phospholipase D Active site motif 663 689 IPR001736 GO:0003824
Prci15g1006 819 Pfam Phospholipase D Active site motif 334 373 IPR001736 GO:0003824
Prci15g1006 819 FunFam Phospholipase D delta 209 451 - -
Prci15g1006 819 Gene3D C2 domain 6 165 IPR035892 -
Prci15g1006 819 Gene3D Endonuclease Chain A 210 449 - -
Prci15g1006 819 Pfam Phospholipase D C terminal 737 810 IPR024632 -
Prci15g1006 819 SUPERFAMILY Phospholipase D/nuclease 164 447 - -
Prci15g1006 819 SMART pld_4 334 373 IPR001736 GO:0003824
Prci15g1006 819 SMART pld_4 662 689 IPR001736 GO:0003824
Prci15g1006 819 Gene3D Endonuclease Chain A 477 703 - -
Prci15g1006 819 SMART C2_3c 8 132 IPR000008 -
Prci15g1006 819 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 158 IPR035892 -
Prci15g1006 819 CDD C2_plant_PLD 4 156 - -
Prci15g1006 819 Pfam C2 domain 9 134 IPR000008 -
Prci15g1006 819 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 334 373 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1006 Prci-Chr15 6262089 6268060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g1006 3 819 Phospholipase D Gene Family (Wang group) AT3G15730 64.234 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1006 K01115 - gmx:100791688 1180.24