Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1004 ATGGCGTGTTTGTTGCATGGGACGCTTTGTGTAACGATATATGATGTTGATAAGCTGCACAATAGATCTAACTTGGATTTTTGCAATAAGGATACGCCTCACAAAACGAAGAGATTTCTAGCCCAAGTCAAGGCTTGTTTACTGTGTCGACCAGAGCTTGTTGGTACTAGATTGTATGCAACAGTTGATTTAGATAAAGCCAGAGTTGCAAGAACCAGAGTGATACGACATCACACTTCCAACCCCAAGTGGAACGAAACCTTTCACATATACTGTGCCCATACGGTGTCACACATTGTATTCACAGTCAAAGATGGAAATCCTATTGGAGCAACCCTGATTGGAAGAGCTTCCGTCCCTGTAGATCAAGTTCTAAAGGGGGACCCAATCAACACACAATTTCAAATATATGATGAAGACTCTCGTCCTATACAAGGTGGCTCTAAAATACATGTCAAAATACAATTCGATCATGTGACCAATGATCCACACTGGTCTAGAGGAATAATGAGTGCAGATTATCCTGGAGTTCCTCATGCATTCCTCAACCAGAGAGAAAATTGCAGAGTAACTTTATACCAAGATGCCCATGTCCTTAATGACTTCATCAAGGTATCTATCCCACTGTCTGGGGGAATTAGATATTATAATCCAGGAAGATGTTGGGAGGACATTTTCAAAGCCATTTGCAATGCTAAGCACTTAATTTACATAACTGGGTGGTCTGTTTACACTAAAATAACCTTAACTAGGAACTATGGGGAGCAAACCATAACTCTAGGAGAGTTGCTTTTGATGAAAGCAGAGGAAGGAGTGAAAGTGCTTATGCTTATTTGGGATGACAGAACTTCTGATAATCTTAAAAAGGAGGGTTTGATGGCAACCCATGATCAAGAAACAGCACAGTACTTTAGGAATACTAAAGTACAATGTATCTTGTGCCCCAGAAATCCTGATGTTGGAAGGAGCATAATTCAAGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAGGCAATAGTTGTTGATAGTGACTTATCTGGCATTAATGAAGGATCAAATGAAGAAACACGTAAAAGGAGTATTGTAAGTTTTATAGGCGGAATTGATCTGTGTGATGGCCGATATGATACACATGAGCATCCTTTGTTTTCAACTCTAAACACAATCCATCAAGATGATTTCCATCAGCCAAACTTTTCAGGAGCTTCTATTAAGAGAGGAGGTCCAAGAGAGCCCTGGCATGACATTCATTGCAAACTAGAAGGACCTGTTGCTTGGGATGTCTTATACAATTTTGAGCAAAGGTGGGAGAAGCAAGTCAGGAAGGGCCTCCTCATACCTCTTTCCATGCATGATCAAATTCTTGTCTCTCCATCTGAAATAAAAGCATTAGAAGACAATGAGAAATGGACTGTTCAGTTGTTTAGGTCCATTGATGGTGGTGCTGTTTCTGGGTTTCCAAAAGACCTAAATGAAGCAGCTGAATTAGGCCTTGTCAGTGGGAAAAATAACATTATTGATAGAAGCATTCAGGATGCTTACATAATTGCTATTAGGCGAGCTAGGAATTTCATCTATATTGAAAACCAGTATTTCCTAGGGAGCTCATATGGTTGGAAAGCAACTGATATAAAAGTTGAAGATATTGGGGCCCTGCATCTTGTACCAAAGGAGCTATCACTGAAGATTGTGAGCAAGATTAAAGCAAGGGAGAGGTTTGTTGTGTACATTGTGATCCCAATGTGGCCTGAAGGTGATCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATATTGATATAGTTGAAGCCATTGAAGAAGTAGGATCTAAAGCGGACCCCACAGAATATCTCACTTTTTTTTGCCTTGGGAATAGAGAGGTAGAGAAACCTGGAGAATATGTTCCTCCAGAGAGACCAGTGCCTGGTAGTAACTATGACAGAGCACAAAAAGCCAGGCGCTTCATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTTGGTTCAGCCAACATAAACCAGAGATCAATGGATGGAGGAAGAGACACAGAAATTGCAATGGGGGCATTCCAGCCACACCATCTAACAGAGGAGGAGAATCGACCAAAAGGTCAGATACATGGATTCAGAAGGGCATTATGGCTTGAGCATCTTGGAGATGTTGATGCCGAAGTGTTGGACCGTCCAGAAAGTGAAGACTGTGTGAAGCTTGTGAACTATGTTACTCAAGAGAACTGGAAATTATACACAAAGGAAACATTTAGTGAGGCTGATTCTAACAACTTTAATCACCTCCTGCGCTACCCCGTTCACATAACAAAAAGTGGGCATGTAACTACCCTTGAAGGATTTGAATTCTTTACTGATACCAAAGCTCGTATTTTAGGTTCGAAAAGTGATTACCTTCCTCCTATCCTCACCACCTAG 2478 0.4076 MACLLHGTLCVTIYDVDKLHNRSNLDFCNKDTPHKTKRFLAQVKACLLCRPELVGTRLYATVDLDKARVARTRVIRHHTSNPKWNETFHIYCAHTVSHIVFTVKDGNPIGATLIGRASVPVDQVLKGDPINTQFQIYDEDSRPIQGGSKIHVKIQFDHVTNDPHWSRGIMSADYPGVPHAFLNQRENCRVTLYQDAHVLNDFIKVSIPLSGGIRYYNPGRCWEDIFKAICNAKHLIYITGWSVYTKITLTRNYGEQTITLGELLLMKAEEGVKVLMLIWDDRTSDNLKKEGLMATHDQETAQYFRNTKVQCILCPRNPDVGRSIIQGLQTSTMFTHHQKAIVVDSDLSGINEGSNEETRKRSIVSFIGGIDLCDGRYDTHEHPLFSTLNTIHQDDFHQPNFSGASIKRGGPREPWHDIHCKLEGPVAWDVLYNFEQRWEKQVRKGLLIPLSMHDQILVSPSEIKALEDNEKWTVQLFRSIDGGAVSGFPKDLNEAAELGLVSGKNNIIDRSIQDAYIIAIRRARNFIYIENQYFLGSSYGWKATDIKVEDIGALHLVPKELSLKIVSKIKARERFVVYIVIPMWPEGDPESASVQAILDWQRRTMEMMYIDIVEAIEEVGSKADPTEYLTFFCLGNREVEKPGEYVPPERPVPGSNYDRAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEENRPKGQIHGFRRALWLEHLGDVDAEVLDRPESEDCVKLVNYVTQENWKLYTKETFSEADSNNFNHLLRYPVHITKSGHVTTLEGFEFFTDTKARILGSKSDYLPPILTT 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1004 825 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 666 693 IPR001736 GO:0003824
Prci15g1004 825 Pfam Phospholipase D Active site motif 667 693 IPR001736 GO:0003824
Prci15g1004 825 Pfam Phospholipase D Active site motif 332 376 IPR001736 GO:0003824
Prci15g1004 825 Pfam C2 domain 7 135 IPR000008 -
Prci15g1004 825 PANTHER PHOSPHOLIPASE D 3 814 IPR015679 -
Prci15g1004 825 FunFam Phospholipase D delta 212 456 - -
Prci15g1004 825 Gene3D Endonuclease Chain A 493 713 - -
Prci15g1004 825 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 376 IPR001736 GO:0003824
Prci15g1004 825 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 156 IPR035892 -
Prci15g1004 825 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Prci15g1004 825 SUPERFAMILY Phospholipase D/nuclease 164 446 - -
Prci15g1004 825 SUPERFAMILY Phospholipase D/nuclease 509 735 - -
Prci15g1004 825 CDD PLDc_pPLD_like_1 215 390 - -
Prci15g1004 825 SMART pld_4 666 693 IPR001736 GO:0003824
Prci15g1004 825 SMART pld_4 332 376 IPR001736 GO:0003824
Prci15g1004 825 SMART C2_3c 8 133 IPR000008 -
Prci15g1004 825 FunFam Phospholipase D 479 712 - -
Prci15g1004 825 Pfam Phospholipase D C terminal 741 815 IPR024632 -
Prci15g1004 825 CDD C2_plant_PLD 4 156 - -
Prci15g1004 825 Gene3D C2 domain 6 167 IPR035892 -
Prci15g1004 825 Gene3D Endonuclease Chain A 213 455 - -
Prci15g1004 825 PIRSF PLD_plant 1 825 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1004 Prci-Chr15 6257385 6260953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g1004 4 825 Phospholipase D Gene Family (Wang group) AT3G15730 61.538 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1004 K01115 - gmx:100791688 1112.06