Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0993 ATGACGCATCACGCATCTGTAGAAAGAATGTGCAATGGCTATAAATTGAGACCAAAATGCGCCATTAAGCAGAATCAAGTGCTAGTGACCAAGTTTGATACAAACACAATTCCCTCTCCTTCATCGATCCTTGGTTTTGAGATCATGAAGCTGTTTGGTATTGCAATACTACTCTCAAGCCTCTTGGTCCAAGAAGCAAGCTTAGTTGTTGGGGACGTTGGCACAGCTAATTCCTATGGACCCCCCTATCTACCGACTGCTTGTGATGGGAGCAAGAGAGAGCAGTTTCCGCCGGGAAATCTGTTCGTGGCGGTAAGCGAAGGGCTGTGGGATAACGGAGCAGCCTGTGGAAGAAGATACAGAATAAGGTGTGTGAGTGGAAACAATAGGCCTTGCAAATCGGACAGTGTTGACGTCAAAGTGGTTGACCTGTGCAAGAAATCGCCATGTCCTAACACAATTCTCTTATCAAAAAGTGCCTTCGCTACCATCTCCCGCTTCCATCATGCTGATATCAACATTGAATATGTCGAGATATAA 540 0.4556 MTHHASVERMCNGYKLRPKCAIKQNQVLVTKFDTNTIPSPSSILGFEIMKLFGIAILLSSLLVQEASLVVGDVGTANSYGPPYLPTACDGSKREQFPPGNLFVAVSEGLWDNGAACGRRYRIRCVSGNNRPCKSDSVDVKVVDLCKKSPCPNTILLSKSAFATISRFHHADINIEYVEI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0993 179 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 74 179 IPR007112 -
Prci15g0993 179 SUPERFAMILY Barwin-like endoglucanases 64 176 IPR036908 -
Prci15g0993 179 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 49 177 - -
Prci15g0993 179 Gene3D - 72 179 IPR036908 -
Prci15g0993 179 Pfam Lytic transglycolase 104 176 IPR009009 -
Prci15g0993 179 CDD DPBB_EG45-like 72 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0993 Prci-Chr15 6213993 6215105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0993 46 171 Expansin Gene Family AT2G45110 29.710 6.17e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0993 - - pcin:129294435 362.073