Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0989 ATGCAGGAGCAAGCTACAAGTTCTATTGCCGCAAGCTCTCTGCCTTCGAGCAGCGAAAAATCATCCAGTTCAGCTCTCCAACTGGAAGTAAAAGAAGGGATTGAGAGTGACGAGGAGATCAGAAGGGTGCCGGAGATCGGCGTTGAGACCGCCGGACCGTCCGCCTCTCGCCCAGACTCCGGTTCAGGTGCTGCTACAGACCGGGCTCAAGGGACAGTGGAGGGTCAAAGGAAGAGAGGGAGAAACTCAGCTGACAAAGAAAGCAAGCGGCTAAAGAGGCTACTGAGGAACAGAGTTTCAGCGCAGCAAGCTAGGGAGAGGAAGAAGGCATATTTGATTGACTTGGAAACTAAGGTTAAAGACTTGGAGAAGAAGAATTCAGAGCTTGAAGAGAGGCTGTCCACCTTACAGAACGAGAATCAGATGCTAAGACATATACTGAAGAACACAACGGCAAGCAGGAGAGGAGGCACTGGTGCTGGAGCCATTGCTGAAGGAACTATGTGA 507 0.5108 MQEQATSSIAASSLPSSSEKSSSSALQLEVKEGIESDEEIRRVPEIGVETAGPSASRPDSGSGAATDRAQGTVEGQRKRGRNSADKESKRLKRLLRNRVSAQQARERKKAYLIDLETKVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTGAGAIAEGTM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0989 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Prci15g0989 168 MobiDBLite consensus disorder prediction 1 106 - -
Prci15g0989 168 FunFam Transcription factor HY5 108 149 - -
Prci15g0989 168 MobiDBLite consensus disorder prediction 1 29 - -
Prci15g0989 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Prci15g0989 168 CDD bZIP_HY5-like 90 141 - -
Prci15g0989 168 SUPERFAMILY Leucine zipper domain 89 147 IPR046347 GO:0003700|GO:0006355
Prci15g0989 168 Coils Coil 84 146 - -
Prci15g0989 168 Pfam bZIP transcription factor 86 146 IPR004827 GO:0003700|GO:0006355
Prci15g0989 168 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Prci15g0989 168 Gene3D Single helix bin 108 149 - -
Prci15g0989 168 MobiDBLite consensus disorder prediction 72 106 - -
Prci15g0989 168 MobiDBLite consensus disorder prediction 55 69 - -
Prci15g0989 168 MobiDBLite consensus disorder prediction 31 45 - -
Prci15g0989 168 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 156 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0989 Prci-Chr15 6196245 6198726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0989 1 164 bZIP Transcription Factor Family AT5G11260 70.482 5.71e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci15g0989 bZIP_1 4.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0989 K16241 - jre:108985133 218.394