Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0978 ATGGGAAACATGAAACCGGGTCAGGGAATAGTTAAAGATTTTAAAGGAAGAGCTACATGTTACAAACAAGACTGGATTACAGGAACCTGTTCTGGCTTCAAGATATTGGGTCCAACTTTTTACATCTTTTTCGCTTCTGCTCTACCTGTTATCGCCTTTGGAGAGCAGCTCAGTAGAGATACTGATGGAGCATTGAGTACGGTGGAAACATTATCATCTACTGCTCTTTGTGGAATTATTCACTCGATATTTGGTGGCCAGCCTCTGCTGATTTTGGGGGTTGCTGAACCCACTGCTATAATGTACACTTATCTGTACGAGATCTGCAAACAAAGGCCAGAACTGGGTGCTGCTCTGTTTCTGCCTTGGGCTGCTTGGGTTTGTGTTTGGACAGGAATCATGTTGATTCTGCTTGCAGTTTTTAATACGTGCACGATCATCAACAAATTTACGAGAATTGCAGGGGAACTATTTGGCATGTTGATTACTGTTCTTTTCATTCAAGAGGCTATAAAGGGACTGGTAGCCGAGTTCCAAATACCTAAGAATGAGAATCCAATGTTGGAGGAATTTCAATTTCAATGGCTGTATGCAAATGGCTTACTTGCTATTATTTTCTCCTTCGGGGTACTTCTCACTGCCCACAAAAGCAGAACTGCAAGATCATGGCGTTACGGAACAGGGTGGATGCGAGCCTTCGTTGCAGATTATGGGGTTCCAGCGGTGGTCTTGATTTGGTCTGCGCTATCTTATATGACACCGGCCAAAATTCCACACGGTGTTCCCAGAAGGCTGGTTTGTCCTCTTCCTTGGGAAGCCGCGTCACTGTACCACTGGACCGTAGTCAAGGACATGGGTAAGGTGCCAGTGCTTTACATCTTTGCGGCAATTATCCCTGCCGTGATGGTGGCAGGTTTATACTTCTTCGATCACAATGTAGCTTCCCAGATGGCTCAACAAAAGGAATTCAACCTTCAAAATCCAGATGCCTACCACCACGATATGTTTCTGCTTGGAATTATGACTTTGATTTGCGGTCTTCTTGGGCTTCCTCCATCCAATGGAGTCCTTCCACAATCCCCCATGCATACCAAGAGTTTAGCAGTTCTTAAGAGGCAGTTGATGCGCAAGAGAGTGGTTAAAAAAGCCAAGGAATGTATTCAGGAACAGAGGAGCAACTCTGAAATATATGGAAAGATGCACGATGTGTTCATAGAAATGGATACAGCCCCAACGAAACAAGAGTTGGAGACTCTGAAAGAGGCTGTGATGAAACCTTATGAGAAAGACGGTGTGAAACAAAAATTTGATCCTGAGAAACAAATTGATGCTTATTTGCCAGTCCGAGTGAACGAGCAAAGGTTAAGCAACTTGTTGCAGTCCCTCCTGGTGGGAGCATCCGTTTTTGCCATGCCGGTTATCAGAATGATACCTACCTCAGTTCTCTGGGGTTATTTCGCTTATATGGCCATTGACAGTCTACCAGGCAATCAGTTCTGGGAAAGAATATTGCTTCTCTTTATCACCCCAGGAAGGCGTCACAAAATTTTGGAAGGCGATCATGCGTCGTTCGTTGAGTCAGTGCCGTTCAAAACCATAGCTCTCTTTACACTGATGCAGTGTCTGTATTTTCTGTTCTGTTTCGGAGTGACATGGATACCTATTGGGGGGGTCTTGTTTCCACTACCGTTCTTCCTTCTCATAGTGATAAGAGAGCACGTGCTTCCCAAGGTATTCAGCAATGGCGATCTCCAGGAACTAGATTCTTCTGAGTACGAGGAAGTTGCTGGTGCCCCTAAAGATCCCACTGAAGTGCCGGAAGCGGATGAGAAATCTGACGATTTCTTTGATGCAGAGTTACTGGATGAGATGACAACCCACAGGGGAGAGATGAAGCATAGAATGAGTTTCAACAGTGAAGACAAATACTAA 1932 0.4482 MGNMKPGQGIVKDFKGRATCYKQDWITGTCSGFKILGPTFYIFFASALPVIAFGEQLSRDTDGALSTVETLSSTALCGIIHSIFGGQPLLILGVAEPTAIMYTYLYEICKQRPELGAALFLPWAAWVCVWTGIMLILLAVFNTCTIINKFTRIAGELFGMLITVLFIQEAIKGLVAEFQIPKNENPMLEEFQFQWLYANGLLAIIFSFGVLLTAHKSRTARSWRYGTGWMRAFVADYGVPAVVLIWSALSYMTPAKIPHGVPRRLVCPLPWEAASLYHWTVVKDMGKVPVLYIFAAIIPAVMVAGLYFFDHNVASQMAQQKEFNLQNPDAYHHDMFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLMRKRVVKKAKECIQEQRSNSEIYGKMHDVFIEMDTAPTKQELETLKEAVMKPYEKDGVKQKFDPEKQIDAYLPVRVNEQRLSNLLQSLLVGASVFAMPVIRMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPGRRHKILEGDHASFVESVPFKTIALFTLMQCLYFLFCFGVTWIPIGGVLFPLPFFLLIVIREHVLPKVFSNGDLQELDSSEYEEVAGAPKDPTEVPEADEKSDDFFDAELLDEMTTHRGEMKHRMSFNSEDKY 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0978 643 Gene3D Helical hairpin bin 17 59 - -
Prci15g0978 643 Pfam HCO3- transporter family 8 179 IPR011531 GO:0006820|GO:0016020
Prci15g0978 643 Pfam HCO3- transporter family 198 391 IPR011531 GO:0006820|GO:0016020
Prci15g0978 643 Pfam HCO3- transporter family 448 538 IPR011531 GO:0006820|GO:0016020
Prci15g0978 643 PANTHER ANION EXCHANGE PROTEIN 4 596 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0978 Prci-Chr15 6146044 6150289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0978 6 642 Antiporters AT4G32510 66.514 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0978 K24194 - gmx:100787412 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0982 2 7278233 7282927 Prci15g0978 15 6146044 6150289 CCT
Prci15g0978 15 6146044 6150289 Prci15g0978 15 6146044 6150289 ECH
Prci15g0978 15 6146044 6150289 Prci13g0990 13 8300175 8305478 ECH
Prci15g0978 15 6146044 6150289 Prci2g0982 2 7278233 7282927 ECH