Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0960 ATGGCTCAGCATAGCAATGACAACAACAGTGCAAGCCAACAATTAGTGAAGCCAGTCTTCCATGATTTTCTGGGCTCGAAGCCCAATGATTCCCACTTCGTTCTGGAACCCAAAACCGCCAACGTGAGGCTGTCCGAGGCGTCGCCGTCCTCGGCATCGATGTCCATTGCCGCCTCATCTAGCGGTGGCCGTGGTCCCTTCTCAACCACATCTGACATCGGTTCTGAAAGAAAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCTAGGAGTGATTTTTCTGACACTGGGCTAAGCAACAGGCTAATAGGAAACAAGAGAAGTAGTTCTGATTCTGCTTTCATGGGATCTTCCAGAGATGCCTTCCAAATGGTCCCTGACTCTATTCAAAACTCACATTTGATGAAAATGTTCCGGAGTACAGCTGGAGGAGAGCATCATAGAAGATCTAACGACGATGAAGTTTTTCTTGGTACGCAGTCACAGAAGCCAACTTCAGCTTCTCAGATATTTCAGCCTCTTACTGGAACCAAGCTTGATGCCAATAGATGGGAACGGTCTGTTATTATGAATGTTGGCCCTTCAATGCATCATCCGCCACATGGGGCTCCATTAACACCTGTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGATGCTAACATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAGGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTGCTGCCACTGAGAAAACTCCATCTGCAATGGTGCTGGGTGGAGGCAGGCCAAAGCGTGTGATGAATATAATAGACTTAGAATCATCCACACCTACAAGCCAAAATGAGTTGAGATCTGCCAGTTGCCAGATGACCATATTCTATGGAGGTCGAGCTCATGTGTTCGATAATGTCCACCCTAACAAGGCAGATGTGATAATGAGCTTAGCAGGGTCAAATGGAGGGAGTTGGTCCACAAGTACTTGCTCGCCCAAGCCTCCTTTGAAGCTGCTTCATGATACTTCACACACTGAAACTGGGAAGCTTCATGCCATTCCCTCTGCTGATCGCATCACTACACCACCATCAGGCAGACCTCAAGGAAGTGTTGCTACTAGGGAAGATGCTAGAAACCCAGTCGAAGTAGCCGAGCTAGATCCAACTTCTCAAGAGAAGAAGACAGCCCAATGA 1215 0.4733 MAQHSNDNNSASQQLVKPVFHDFLGSKPNDSHFVLEPKTANVRLSEASPSSASMSIAASSSGGRGPFSTTSDIGSERKVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRSSSDSAFMGSSRDAFQMVPDSIQNSHLMKMFRSTAGGEHHRRSNDDEVFLGTQSQKPTSASQIFQPLTGTKLDANRWERSVIMNVGPSMHHPPHGAPLTPVVHQIASNKVRDANIGPSFISQSAADEGSRTGMKGPGILSSINITTAATEKTPSAMVLGGGRPKRVMNIIDLESSTPTSQNELRSASCQMTIFYGGRAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSPKPPLKLLHDTSHTETGKLHAIPSADRITTPPSGRPQGSVATREDARNPVEVAELDPTSQEKKTAQ 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0960 404 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 358 IPR040390 -
Prci15g0960 404 SMART tify_2 292 327 IPR010399 -
Prci15g0960 404 MobiDBLite consensus disorder prediction 352 404 - -
Prci15g0960 404 Pfam tify domain 295 326 IPR010399 -
Prci15g0960 404 MobiDBLite consensus disorder prediction 45 75 - -
Prci15g0960 404 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0960 Prci-Chr15 6058120 6062819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0960 17 325 Tify Gene Family AT4G32570 39.375 1.72e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci15g0960 tify 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0960 - - pcin:129294719 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0968 2 7128947 7135116 Prci15g0960 15 6058120 6062819 CCT