Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0959 ATGGCTCAGCATAGCAATGACAACAACAGTGCAAGCCAACAATTAGTGAAGCCAGTCTTCCATGATTTTCTGGGCTCGAAGCCCAATGATTCCCACTTCGTTCTGGAACCCAAAACCGCCAACGTGAGGCTGTCCGAGGCGTCGCCGTCCTCGGCATCGATGTCCATTGCCGCCTCATCTAGCGGTGGCCGTGGTCCCTTCTCAACCACATCTGACATCGGTTCTGAAAGAAAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACCTAGGAGTGATTTTTCTGACACTGGGCTAAGCAACAGGCTAATAGGAAACAAGAGAAGTAGTTCTGATTCTGCTTTCATGGGATCTTCCAGAGATGCCTTCCAAATGGTCCCTGACTCTATTCAAAACTCACATTTGATGAAAATGTTCCGGAGTACAGCTGGAGGAGAGCATCATAGAAGATCTAACGACGATGAAGTTTTTCTTGGTACGCAGTCACAGAAGCCAACTTCAGCTTCTCAGATATTTCAGCCTCTTACTGGAACCAAGCTTGATGCCAATAGATGGGAACGGTCTGTTATTATGAATGTTGGCCCTTCAATGCATCATCCGCCACATGGGGCTCCATTAACACCTGTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGATGCTAACATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAGGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTGCTGCCACTGAGAAAACTCCATCTGCAATGGTGCTGGGTGGAGGCAGGCCAAAGCGTGTGATGAATATAATAGACTTAGAATCATCCACACCTACAAGCCAAAATGAGTTGAGATCTGCCAGTTGCCAGATGACCATATTCTATGGAGGTCGAGCTCATGTGTTCGATAATGTCCACCCTAACAAGGCAGATGTGATAATGAGCTTAGCAGGGTCAAATGGAGGGAGTTGGTCCACAAGTACTTGCTCGCCCAAGCCTCCTTTGAAGCTGCTTCATGATACTTCACACACTGAAACTGGGAAGCTTCATGCCATTCCCTCTGCTGATCGCATCACTACACCACCATCAGACCTCAAGGAAGTGTTGCTACTAGGGAAGATGCTAGAAACCCAGTCGAAGTAG 1167 0.4722 MAQHSNDNNSASQQLVKPVFHDFLGSKPNDSHFVLEPKTANVRLSEASPSSASMSIAASSSGGRGPFSTTSDIGSERKVGNHLEGVPFYGPRSDFSDTGLSNRLIGNKRSSSDSAFMGSSRDAFQMVPDSIQNSHLMKMFRSTAGGEHHRRSNDDEVFLGTQSQKPTSASQIFQPLTGTKLDANRWERSVIMNVGPSMHHPPHGAPLTPVVHQIASNKVRDANIGPSFISQSAADEGSRTGMKGPGILSSINITTAATEKTPSAMVLGGGRPKRVMNIIDLESSTPTSQNELRSASCQMTIFYGGRAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSPKPPLKLLHDTSHTETGKLHAIPSADRITTPPSDLKEVLLLGKMLETQSK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0959 388 SMART tify_2 292 327 IPR010399 -
Prci15g0959 388 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 348 IPR040390 -
Prci15g0959 388 Pfam tify domain 295 326 IPR010399 -
Prci15g0959 388 MobiDBLite consensus disorder prediction 45 75 - -
Prci15g0959 388 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0959 Prci-Chr15 6058119 6062819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0959 17 325 Tify Gene Family AT4G32570 39.688 1.23e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci15g0959 tify 2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0959 - - pcin:129294719 725.702