Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0957 ATGAATAAAGGAAGTACTTTTTATGCTGAAGATGAGAAGTTTCCTTTCCGAATCACTAGAGCAAGGGCAAGAGCCTTGGGATCACTAGGAGGAATACCCACTTCCTCGAGGCCATCCTTTAAACAAGAACAGAAGCGTGCCCATCCAGCAAAGTCCAAAAGAGCAGCATCTGATGAGAGCAAAGCTTCGGTGGTTATTCCTGATGGTCTTCAGAAAAAGAGGCGGGCAATGCTCACAGATGTAACAAACATTTGTGAAAATTCATATCATAAAAGAATTGATGCACCCAGTTTCCAGGCAAAAGGAGGTAAAAAAACAAAGTCAGCTTCTGTTGTGTCCACAGAAGTTTCTTCAACACAAGAAGACGATAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGATGGTGGAATCACGCAACACTACTGATGCATTAAAGTTGGAAGACAAAATGCCACCACAACAATGCATGTCCAATGGTGTAGGAGATTGTCTTTTGGCAGATCCCATGCTTTCAACGCAGGACTCTGTGGTGTCTGATGAAATCCTGACCGCTCCAGATAAAGAAATAGAGAAACTAAGACCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAGTTTGGAGTTTATATGCCCCAGACATATACAAAATCATACGTGTCACAGAGCTTGAAAGAAGACCATCAACTGATTACATGGAGAAGTTACAGCAGGACGTCAATCCCAACATGCGGGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAACTGGTTCCAGATACTCTTTACCTTACTGTAAATCTCATCGACCGGTTTCTCTCTATAAGCTTAACTACGAAACAAAAGCTTCAGCTTGTTGGTGTCGCTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGCGCTCCTCGAGTGGAAGATTTCTGCTTCATCACAGATAATACATACACGAGAGATGAGGTATTGAAAATGGAGAGTGAGGTTTTAAATCTTCTGCATTTTCAGTTAGCTGTTCCCACCACCAAAACATTTCTCAGGAGATACATCCAAGTAGCACAATGTTCCTACAAGGTTCCATGTGTTGAACTGGAATTATTGGCAAATTATTTAGCTGAGCTTACACTCGTTGAATACAACTTCCTCAAGTTCTTACCTTCCCTTATTGCTGCATCTGCTATCTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACACCCATGGAACCCAACCCTGGAGCATTACACAAGTTACAAAGCACCAGCGCTTAAAGCTAGTGTTCTTGCTCTGGAAGATTTACAATCCAATACCAAGTCATGTTCCCTGAATGCGATACGAGAAAAATATAGACTTCAAAAGATGTTGGAATCAATGCGGTTCCTTTGA 1416 0.4153 MNKGSTFYAEDEKFPFRITRARARALGSLGGIPTSSRPSFKQEQKRAHPAKSKRAASDESKASVVIPDGLQKKRRAMLTDVTNICENSYHKRIDAPSFQAKGGKKTKSASVVSTEVSSTQEDDKTKLAEELSKIRMVESRNTTDALKLEDKMPPQQCMSNGVGDCLLADPMLSTQDSVVSDEILTAPDKEIEKLRPSDGLGIVDIDSELKDSQVWSLYAPDIYKIIRVTELERRPSTDYMEKLQQDVNPNMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEDFCFITDNTYTRDEVLKMESEVLNLLHFQLAVPTTKTFLRRYIQVAQCSYKVPCVELELLANYLAELTLVEYNFLKFLPSLIAASAIFLARWTLNQSEHPWNPTLEHYTSYKAPALKASVLALEDLQSNTKSCSLNAIREKYRLQKMLESMRFL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0957 471 Gene3D - 221 465 - -
Prci15g0957 471 Gene3D - 235 348 - -
Prci15g0957 471 SUPERFAMILY Cyclin-like 211 347 IPR036915 -
Prci15g0957 471 PIRSF Cyclin_A_B_D_E 31 467 IPR046965 GO:0016538|GO:0044772
Prci15g0957 471 PANTHER CYCLINS 158 438 IPR039361 -
Prci15g0957 471 MobiDBLite consensus disorder prediction 28 68 - -
Prci15g0957 471 MobiDBLite consensus disorder prediction 103 118 - -
Prci15g0957 471 CDD CYCLIN_AtCycA-like_rpt2 350 463 - -
Prci15g0957 471 MobiDBLite consensus disorder prediction 99 124 - -
Prci15g0957 471 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Prci15g0957 471 SMART cyclin_7 257 341 IPR013763 -
Prci15g0957 471 SMART cyclin_7 354 442 IPR013763 -
Prci15g0957 471 SMART Cyclin_C_2 350 468 IPR004367 -
Prci15g0957 471 CDD CYCLIN_AtCycA_like_rpt1 211 346 - -
Prci15g0957 471 Pfam Cyclin, N-terminal domain 221 347 IPR006671 -
Prci15g0957 471 Pfam Cyclin, C-terminal domain 350 466 IPR004367 -
Prci15g0957 471 FunFam Mitotic cyclin 6 235 335 - -
Prci15g0957 471 FunFam Cyclin A1 337 467 - -
Prci15g0957 471 SUPERFAMILY Cyclin-like 349 464 IPR036915 -
Prci15g0957 471 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0957 Prci-Chr15 6039363 6044690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0957 17 464 Core Cell Cycle Gene Families AT5G25380 53.571 2.08e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0957 K06627 - qsa:O6P43_015635 549.28