Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0955 ATGAATAAAGGAAGTACTTTTTATGCTGAAGATGAGAAGTTTCCTTTCCGAATCACTAGAGCAAGGGCAAGAGCCTTGGGATCACTAGGAGGAATACCCACTTCCTCGAGGCCATCCTTTAAACAAGAACAGAAGCGTGCCCATCCAGCAAAGTCCAAAAGAGCAGCATCTGATGAGAGCAAAGCTTCGGTGGTTATTCCTGATGGTCTTCAGAAAAAGAGGCGGGCAATGCTCACAGATGTAACAAACATTTGTGAAAATTCATATCATAAAAGAATTGATGCACCCAGTTTCCAGGCAAAAGGAGGTAAAAAAACAAAGTCAGCTTCTGTTGTGTCCACAGAAGTTTCTTCAACACAAGAAGACGATAAAACAAAGTTAGCTGAAGAATTATCCAAAATAAGGATGGTGGAATCACGCAACACTACTGATGCATTAAAGTTGGAAGACAAAATGCCACCACAACAATGCATGTCCAATGGTGTAGGAGATTGTCTTTTGGCAGATCCCATGCTTTCAACGCAGGACTCTGTGGTGTCTGATGAAATCCTGACCGCTCCAGATAAAGAAATAGAGAAACTAAGACCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAGTTTGGAGTTTATATGCCCCAGACATATACAAAATCATACGTGTCACAGAGCTTGAAAGAAGACCATCAACTGATTACATGGAGAAGTTACAGCAGGACGTCAATCCCAACATGCGGGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAACTGGTTCCAGATACTCTTTACCTTACTGTAAATCTCATCGACCGGTTTCTCTCTATAAGCTTAACTACGAAACAAAAGCTTCAGCTTGTTGGTGTCGCTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGCGCTCCTCGAGTGGAAGATTTCTGCTTCATCACAGATAATACATACACGAGAGATGAGGTATTGAAAATGGAGAGTGAGGTTTTAAATCTTCTGCATTTTCAGTTAGCTGTTCCCACCACCAAAACATTTCTCAGGAGATACATCCAAGTAGCACAATGTTCCTACAAGGTTCCATGTGTTGAACTGGAATTATTGGCAAATTATTTAGCTGAGCTTACACTCGTTGAATACAACTTCCTCAAGTTCTTACCTTCCCTTATTGCTGCATCTGCTATCTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACACCCATGGAACCCAACCCTGGAGCATTACACAAGTTACAAAGCACCAGCGCTTAAAGCTAGTGTTCTTGCTCTGGAAGATTTACAATCCAATACCAAGTCATGTTCCCTGAATGCGATACGAGAAAAATATAGACTTCAAAAGTTCAAGCGCGTGGCAGCATTGTCTGCAAAAACAGTGCTACCTCTTTTCGAGACTCAATTGTAG 1452 0.4174 MNKGSTFYAEDEKFPFRITRARARALGSLGGIPTSSRPSFKQEQKRAHPAKSKRAASDESKASVVIPDGLQKKRRAMLTDVTNICENSYHKRIDAPSFQAKGGKKTKSASVVSTEVSSTQEDDKTKLAEELSKIRMVESRNTTDALKLEDKMPPQQCMSNGVGDCLLADPMLSTQDSVVSDEILTAPDKEIEKLRPSDGLGIVDIDSELKDSQVWSLYAPDIYKIIRVTELERRPSTDYMEKLQQDVNPNMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEDFCFITDNTYTRDEVLKMESEVLNLLHFQLAVPTTKTFLRRYIQVAQCSYKVPCVELELLANYLAELTLVEYNFLKFLPSLIAASAIFLARWTLNQSEHPWNPTLEHYTSYKAPALKASVLALEDLQSNTKSCSLNAIREKYRLQKFKRVAALSAKTVLPLFETQL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0955 483 SMART Cyclin_C_2 350 473 IPR004367 -
Prci15g0955 483 PIRSF Cyclin_A_B_D_E 31 481 IPR046965 GO:0016538|GO:0044772
Prci15g0955 483 FunFam Cyclin A1 337 469 - -
Prci15g0955 483 MobiDBLite consensus disorder prediction 28 68 - -
Prci15g0955 483 MobiDBLite consensus disorder prediction 103 118 - -
Prci15g0955 483 Gene3D - 235 348 - -
Prci15g0955 483 SUPERFAMILY Cyclin-like 349 472 IPR036915 -
Prci15g0955 483 MobiDBLite consensus disorder prediction 99 124 - -
Prci15g0955 483 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Prci15g0955 483 SMART cyclin_7 257 341 IPR013763 -
Prci15g0955 483 SMART cyclin_7 354 442 IPR013763 -
Prci15g0955 483 CDD CYCLIN_AtCycA_like_rpt1 211 346 - -
Prci15g0955 483 CDD CYCLIN_AtCycA-like_rpt2 350 464 - -
Prci15g0955 483 Pfam Cyclin, C-terminal domain 350 471 IPR004367 -
Prci15g0955 483 Pfam Cyclin, N-terminal domain 221 347 IPR006671 -
Prci15g0955 483 FunFam Mitotic cyclin 6 235 335 - -
Prci15g0955 483 Gene3D - 221 469 - -
Prci15g0955 483 SUPERFAMILY Cyclin-like 211 347 IPR036915 -
Prci15g0955 483 PANTHER CYCLINS 159 438 IPR039361 -
Prci15g0955 483 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0955 Prci-Chr15 6039047 6044690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0955 17 472 Core Cell Cycle Gene Families AT5G25380 53.947 2.47e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0955 K06627 - qsa:O6P43_015635 558.91