Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0947 ATGGGGGTGGATTACTACAATATATTGAAGGTTGTTAAAAATGCTACAGACGATGACCTGAAGAAGTCATACAGAAAGTTGGCCATGAAATGGCATCCTGACAAGAATCCCAACAACAAAAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCAGATGCCTATGAGGTACTAAGCGACCCTCAGAAGAGGATGATCTATGATCAGCATGGAGAGGAAGGGTTGCAAGATATGCCACCGCCAGGGAATGGACCATCAAGTGGGTTTAATCCCAGAAACGCTGAGGATATTTTTGCAGAATTCTTTGGGAGTAGCCCTTTTGGATTTGGATCGTCTGGACCAGGCAAGTCCATGAAGTACCAACCGGAAGGGCCTGGAATATATGGTGGTTTTGGCGGAGGCGACAACATTTTTCGTACATGCAATGAAGGTAAGCAAATGCCGAAAAAACCACCAGCTGTGGAGAGCAAACTGCCTTGCAGCCTGGAGGAGTTATACTCTGGATCCACTAGGAAAATGAAGATCTCAAGGACTATTGATGCCAACGGACGGCCAGTCACAGAAACAGAGATGCTAAGCATTGATGTAAAACCGGGGTGGAAGAAAGGGACCAAGATCACTTTCCCAGATAAAGGGAATCAACAGCCAAATCTACTTCCAGCTGACCTGGTGTTTGTGATTGACGAAAAGCCTCACGATCTGTACACGAGAGATGGCAATGACCTGATTGTGAGCCTAAGGGTGTCGCTAGCAGAGGCAATAGGAGGAACAACAGTGAACCTCACCACCCTTGATGGACGGAGTCTATCAATACCAGTGACTGACATTGTGAGCCCTGGTTATGAGCTTCTTGTTCCAAAGCAAGGGATGCCAATAGCAAAGGAGCCTAGGAACATGGGTGATTTGAAGATCAGATTTGAGGTCAAGTTCCCAACACGGTTGACGCCAGAGCAACAAGCAGGGCTCAAACGCGCATTGGGAGGTTAA 984 0.4685 MGVDYYNILKVVKNATDDDLKKSYRKLAMKWHPDKNPNNKKEAEAKFKQISDAYEVLSDPQKRMIYDQHGEEGLQDMPPPGNGPSSGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSMKYQPEGPGIYGGFGGGDNIFRTCNEGKQMPKKPPAVESKLPCSLEELYSGSTRKMKISRTIDANGRPVTETEMLSIDVKPGWKKGTKITFPDKGNQQPNLLPADLVFVIDEKPHDLYTRDGNDLIVSLRVSLAEAIGGTTVNLTTLDGRSLSIPVTDIVSPGYELLVPKQGMPIAKEPRNMGDLKIRFEVKFPTRLTPEQQAGLKRALGG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0947 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Prci15g0947 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Prci15g0947 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Prci15g0947 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Prci15g0947 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Prci15g0947 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 154 232 IPR008971 GO:0006457|GO:0051082
Prci15g0947 327 CDD DnaJ 4 59 IPR001623 -
Prci15g0947 327 SUPERFAMILY Chaperone J-domain 3 110 IPR036869 -
Prci15g0947 327 FunFam DnaJ subfamily B member 13 231 311 - -
Prci15g0947 327 Pfam DnaJ domain 4 67 IPR001623 -
Prci15g0947 327 Gene3D - 230 326 - -
Prci15g0947 327 Pfam DnaJ C terminal domain 153 310 IPR002939 -
Prci15g0947 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Prci15g0947 327 Gene3D DnaJ domain 3 111 IPR036869 -
Prci15g0947 327 FunFam Dnaj homolog subfamily b member 148 229 - -
Prci15g0947 327 Gene3D - 151 229 - -
Prci15g0947 327 SMART dnaj_3 3 62 IPR001623 -
Prci15g0947 327 CDD DnaJ_C 153 313 - -
Prci15g0947 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Prci15g0947 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 318 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0947 Prci-Chr15 6011249 6013736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0947 5 114 C2H2 Transcription Factor Family AT1G74250 36.522 3.01e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0947 K09510 - qsa:O6P43_019394 504.597