Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0885 ATGGCTGTGGAGCTCATGGGGTTCCCCAAAATCGACGAGCAGAAGGCAATCCAGGAGGCTGCATCGGAAGGCCTGAAGGGTATGGAACACCTGATCCGTCTTCTCTCTCACCAGCCCAATAGGATGGACTGCACTGACCTCACCGATATCACCGTTTCTAAGTTTAAAAAGCTCATTTCCCTCCTCAACCGTACCGGCCACGCCCGCTTCAGGCGAGGACCCTTACCTTCCTCCCCGTCTTCTTCTACCGCGCCACCGCCGCAGCCCTCCATCTCGATTCCTCAAATGCATACATTTAGCCTGTCTCCGCCACAGTTCACCTCTCCGGCTACCGTGTCTCCGAGTCCTGTTGTAAATCAGGCTCCTATGCAGAACGCGCCTTCGAGTTTCGTTCAGTCTCAGGCGCCGCAGAGTTTGACTCTTGATTTTACCAAGCCTAGCATCGTAAGCTCCAAGACTAAACCCCCAGAGTTGGAGTTCTCGAAGGAAACCTTCAGTGTCTCGTCTAATTCGTCGTTTATGTCGTCCGCAATTACTGGAGACGGAAGCGTCTCGAACGGAAAGCAAGGTTGCTCCCTCTTCATGACTCCGGCGGCACCGACAGTGTCCGGTGGAAAGCCACCTCTGTCCTCGGGGCAGTTCAAGAAAAGATGCCATGAGCACCGCGACCGCTCCGACGACGTGTCGGGGTCCAGCAAATGTCACTGTGTTAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCAAAGGTTGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGGTCACCATACCCACGAGGTTACTACAAGTGCAGCACAGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAACGGGCGACGGATGATCCGGCGATGCTGATCGTGACGTACGAGGGGGAGCACCGACATGTGATTCAGGGTGCGATGCAGGAGAACGTGGCCGGGAATGTGGGTTTGGTGTTCGAGTCAACGTGA 1023 0.5552 MAVELMGFPKIDEQKAIQEAASEGLKGMEHLIRLLSHQPNRMDCTDLTDITVSKFKKLISLLNRTGHARFRRGPLPSSPSSSTAPPPQPSISIPQMHTFSLSPPQFTSPATVSPSPVVNQAPMQNAPSSFVQSQAPQSLTLDFTKPSIVSSKTKPPELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGCSLFMTPAAPTVSGGKPPLSSGQFKKRCHEHRDRSDDVSGSSKCHCVKRRKNRVKKTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEGEHRHVIQGAMQENVAGNVGLVFEST 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0885 340 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci15g0885 340 SUPERFAMILY WRKY DNA-binding domain 259 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci15g0885 340 MobiDBLite consensus disorder prediction 93 134 - -
Prci15g0885 340 FunFam WRKY transcription factor 65 245 322 - -
Prci15g0885 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 321 IPR044810 GO:0003700
Prci15g0885 340 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci15g0885 340 Gene3D WRKY domain 247 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci15g0885 340 Pfam WRKY DNA -binding domain 263 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci15g0885 340 MobiDBLite consensus disorder prediction 69 134 - -
Prci15g0885 340 Pfam Plant zinc cluster domain 215 259 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0885 Prci-Chr15 5726828 5728722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0885 1 339 WRKY Transcription Factor Family AT2G24570 60.399 7.16e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci15g0885 WRKY 9.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0885 - - tcc:18587637 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0885 15 5726828 5728722 Prci15g0885 15 5726828 5728722 ECH