Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0878 ATGGACTCACCGAGGAAATTTTTCACCCATGTCATGTCTTTTGTGCACGGAAAGGCAAAATTCAAGGTAGCTGATATTCCAGGAACGGTGGCAAAAGGGGCACCGGATTTCTGTTCTGTCTATGTTGTCGCTAAAGAAAAGATTCAAACAATGCGATCAGCTTCTCGTCCTGCTCCAGCCATTTCCCTTCCTAGCAAGCATAATCAAGCAAGCATCAAGTCAAACCTAGCAGAGACAAAAATGCCGTTAACTAATCATGCACATGAAAAGCTATCCACTGGTGTGAAAAGTAAATTAGAGGATGAAACTGAATCTTTCAGGTCACCAGTAACTGGGAGAAATTTGAATAGCAAGTCACATAAGGAAAATCCCCTTCCAGGTACTGACGTATCCTTTGTAAGCTCTGAAAGACCAAGTCCAAACCATATATTCTGTTTGTTATACGACGGCTCTGATTCAGGGATGTCCAGCCCTGGGGTAGCACTCAGCTCAGAGATAGACGGGAACTACAGCTTTGAGTTACTGCAGAACCGAAGGGGGTCTATAGATATTAGCTCTCCTTTGGAATCCTTCTCATCAGATGGAAATGGACTTTTAACACCACATGTCACGGATGATATGGAGGCTGAAATGAGGAGACTGAAATTAGAACTTAAGAGAACAATGGAAATGTATAGCATTGCCTGTAAAGAAGCGCTCGTAGCACAGCAGGAGACTGTAGAACTCCAACGTTGGAAAAGGAAGGAAGAAAGAAAAGTGGAAGAGGCAAAGCTTGTTGGGGAAGCTGTTTTAGAAGTTGCAGAAAAGGAGATGGCTAATGCCAAAGCAGCTAAGGAGGTTGTTGAAGCACATCGGAGGATTGAGGATCTGGAAGCAAAAAGGAGAGGAGTTGTAGAAATTAAAGCACTCAAAGAATCGGAAGAGAAAACAAAAGCACTAGATGCTTTTACGAACAGAGACATTGGGTATAGAAGGTATTCAATTGAGGAGATTGAAGCTGCGACAGAGTTCTTTACAGATTCATTAAAGATTGGAGAAGGGGGTTATGGTCCAGTATATAGGTGCCATTTGGACCATACCCCTGTGGCAGTGAAGGTTCTACGTCCTGATGCAGCACAAGGGAGGTCACAATTTCAAAGAGAGGTTGAGGTACTGAGCTGCATAAGGCATCCAAACATGGTTCTTCTCCTGGGAGCCTGCCCAGAGTATGGCTGCCTTGTCTATGATTACATGGCCAATGGAAGCTTAGAAGATCGCCTCTTTCGTCGAGGGAACACTCCCTCACTTCCTTGGCAGATTAGGTTCAAAATTGCAGTTGAAATAAGCACTGGCTTGTTGTTTCTGCACCAGAGAAAACCAGAGCCTCTAGTGCATAGGGACTTGAAACCAGCTAACATCCTGCTTGACAGCAACTATGTAGCCAAGATTGGTGATGTAGGCTTAGCCAGGCTAGTTCCACCATCTCTGGCTGGCAGTACGACACAATATCAAATGACATCAACTGCCGGAACTTTCTGTTATATAGATCCAGAGTACCAACAGACGGGAATGCTTGGGGTGAAGTCTGATATATACTCCCTTGGGATAATTTTCCTGCAGATTTTAACAGCTAAACCACCAATGGGTTTGACCCATCATGTTGAGAGAGCTATTGAGAAAAGAGCATTTGCTCAGATACTCGATCCAACAGTGCCTGACTGGCCTGTAGAGGAGGCCTTGAGTCTAGCAAATATGGCACTTCAGTGTTCCCAGTTAAGGCGAAAAGATAGGCCTGATCTCGCCAAGGTTGTCTTGCCTGAACTGCACAAGTTGAGAAATCTTGCTGAAAAAATTAATTGCCTTGCACCCTAA 1851 0.4435 MDSPRKFFTHVMSFVHGKAKFKVADIPGTVAKGAPDFCSVYVVAKEKIQTMRSASRPAPAISLPSKHNQASIKSNLAETKMPLTNHAHEKLSTGVKSKLEDETESFRSPVTGRNLNSKSHKENPLPGTDVSFVSSERPSPNHIFCLLYDGSDSGMSSPGVALSSEIDGNYSFELLQNRRGSIDISSPLESFSSDGNGLLTPHVTDDMEAEMRRLKLELKRTMEMYSIACKEALVAQQETVELQRWKRKEERKVEEAKLVGEAVLEVAEKEMANAKAAKEVVEAHRRIEDLEAKRRGVVEIKALKESEEKTKALDAFTNRDIGYRRYSIEEIEAATEFFTDSLKIGEGGYGPVYRCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYDYMANGSLEDRLFRRGNTPSLPWQIRFKIAVEISTGLLFLHQRKPEPLVHRDLKPANILLDSNYVAKIGDVGLARLVPPSLAGSTTQYQMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHHVERAIEKRAFAQILDPTVPDWPVEEALSLANMALQCSQLRRKDRPDLAKVVLPELHKLRNLAEKINCLAP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0878 616 MobiDBLite consensus disorder prediction 108 129 - -
Prci15g0878 616 Coils Coil 264 293 - -
Prci15g0878 616 Coils Coil 204 224 - -
Prci15g0878 616 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 310 410 - -
Prci15g0878 616 Gene3D Transferase(Phosphotransferase) domain 1 411 613 - -
Prci15g0878 616 Pfam Protein kinase domain 340 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0878 616 PANTHER OS02G0152300 PROTEIN 13 610 - -
Prci15g0878 616 ProSiteProfiles Protein kinase domain profile. 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0878 616 SMART serkin_6 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0878 616 MobiDBLite consensus disorder prediction 89 129 - -
Prci15g0878 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Prci15g0878 616 MobiDBLite consensus disorder prediction 91 107 - -
Prci15g0878 616 SUPERFAMILY Protein kinase-like (PK-like) 320 597 IPR011009 -
Prci15g0878 616 Gene3D Phosphorylase Kinase; domain 1 316 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0878 Prci-Chr15 5670561 5674087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0878 20 610 Receptor kinase-like Gene Family AT5G35380 55.686 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci15g0878 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0878 - - pcin:129294308 1148.27