Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0876 ATGAAGAATTTGAAGGATCAATCAGAGAAGCATGAGAAGAAGAATGGGAATGGAATAGTGGCAGTAGGAATAGACAAAGACAAGGGAAGCCAAAATGCACTCAAATGGGCAGCTGAACATCTCCTCGCGAGAGGCTCAACTGTAGTTCTCATCCATGTCAAAGTGAAGGGAACTTCTCATCAAGCTTCATGGTCATGGACAAATAGTTCTGCAGACAAAGGTTCATTGCCCCACAAGGACTCGGATGGACTCACCGAGGAAATTTTTCACCCATGTCATGTCTTTTGTGCACGGAAAGGCATACAATGCAAGAATGTCATACTAGAAGATACAGATGTAGCGAGAGCTTTGATTGAACATGCTTTTCGCACGGCTATCGAGCATTTAGTTCTTGGCTTGTCAAATAAAAATGGTTTGTTTAGAAAATTCAAGGTAGCTGATATTCCAGGAACGGTGGCAAAAGGGGCACCGGATTTCTGTTCTGTCTATGTTGTCGCTAAAGAAAAGATTCAAACAATGCGATCAGCTTCTCGTCCTGCTCCAGCCATTTCCCTTCCTAGCAAGCATAATCAAGCAAGCATCAAGTCAAACCTAGCAGAGACAAAAATGCCGTTAACTAATCATGCACATGAAAAGCTATCCACTGGTGTGAAAAGTAAATTAGAGGATGAAACTGAATCTTTCAGGTCACCAGTAACTGGGAGAAATTTGAATAGCAAGTCACATAAGGAAAATCCCCTTCCAGGTACTGACGTATCCTTTGTAAGCTCTGAAAGACCAAGTCCAAACCATATATTCTGTTTGTTATACGACGGCTCTGATTCAGGGATGTCCAGCCCTGGGGTAGCACTCAGCTCAGAGATAGACGGGAACTACAGCTTTGAGTTACTGCAGAACCGAAGGGGGTCTATAGATATTAGCTCTCCTTTGGAATCCTTCTCATCAGATGGAAATGGACTTTTAACACCACATGTCACGGATGATATGGAGGCTGAAATGAGGAGACTGAAATTAGAACTTAAGAGAACAATGGAAATGTATAGCATTGCCTGTAAAGAAGCGCTCGTAGCACAGCAGGAGACTGTAGAACTCCAACGTTGGAAAAGGAAGGAAGAAAGAAAAGTGGAAGAGGCAAAGCTTGTTGGGGAAGCTGTTTTAGAAGTTGCAGAAAAGGAGATGGCTAATGCCAAAGCAGCTAAGGAGGTTGTTGAAGCACATCGGAGGATTGAGGATCTGGAAGCAAAAAGGAGAGGAGTTGTAGAAATTAAAGCACTCAAAGAATCGGAAGAGAAAACAAAAGCACTAGATGCTTTTACGAACAGAGACATTGGGTATAGAAGGTATTCAATTGAGGAGATTGAAGCTGCGACAGAGTTCTTTACAGATTCATTAAAGATTGGAGAAGGGGGTTATGGTCCAGTATATAGGTGCCATTTGGACCATACCCCTGTGGCAGTGAAGGTTCTACGTCCTGATGCAGCACAAGGGAGGTCACAATTTCAAAGAGAGGTTGAGGTACTGAGCTGCATAAGGCATCCAAACATGGTTCTTCTCCTGGGAGCCTGCCCAGAGTATGGCTGCCTTGTCTATGATTACATGGCCAATGGAAGCTTAGAAGATCGCCTCTTTCGTCGAGGGAACACTCCCTCACTTCCTTGGCAGATTAGGTTCAAAATTGCAGTTGAAATAAGCACTGGCTTGTTGTTTCTGCACCAGAGAAAACCAGAGCCTCTAGTGCATAGGGACTTGAAACCAGCTAACATCCTGCTTGACAGCAACTATGTAGCCAAGATTGGTGATGTAGGCTTAGCCAGGCTAGTTCCACCATCTCTGGCTGGCAGTACGACACAATATCAAATGACATCAACTGCCGGAACTTTCTGTTATATAGATCCAGAGTACCAACAGACGGGAATGCTTGGGGTGAAGTCTGATATATACTCCCTTGGGATAATTTTCCTGCAGATTTTAACAGCTAAACCACCAATGGGTTTGACCCATCATGTTGAGAGAGCTATTGAGAAAAGAGCATTTGCTCAGATACTCGATCCAACAGTGCCTGACTGGCCTGTAGAGGAGGCCTTGAGTCTAGCAAATATGGCACTTCAGTGTTCCCAGTTAAGGCGAAAAGATAGGCCTGATCTCGCCAAGGTTGTCTTGCCTGAACTGCACAAGTTGAGAAATCTTGCTGAAAAAATTAATTGCCTTGCACCCTAA 2217 0.4398 MKNLKDQSEKHEKKNGNGIVAVGIDKDKGSQNALKWAAEHLLARGSTVVLIHVKVKGTSHQASWSWTNSSADKGSLPHKDSDGLTEEIFHPCHVFCARKGIQCKNVILEDTDVARALIEHAFRTAIEHLVLGLSNKNGLFRKFKVADIPGTVAKGAPDFCSVYVVAKEKIQTMRSASRPAPAISLPSKHNQASIKSNLAETKMPLTNHAHEKLSTGVKSKLEDETESFRSPVTGRNLNSKSHKENPLPGTDVSFVSSERPSPNHIFCLLYDGSDSGMSSPGVALSSEIDGNYSFELLQNRRGSIDISSPLESFSSDGNGLLTPHVTDDMEAEMRRLKLELKRTMEMYSIACKEALVAQQETVELQRWKRKEERKVEEAKLVGEAVLEVAEKEMANAKAAKEVVEAHRRIEDLEAKRRGVVEIKALKESEEKTKALDAFTNRDIGYRRYSIEEIEAATEFFTDSLKIGEGGYGPVYRCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYDYMANGSLEDRLFRRGNTPSLPWQIRFKIAVEISTGLLFLHQRKPEPLVHRDLKPANILLDSNYVAKIGDVGLARLVPPSLAGSTTQYQMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHHVERAIEKRAFAQILDPTVPDWPVEEALSLANMALQCSQLRRKDRPDLAKVVLPELHKLRNLAEKINCLAP 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0876 738 MobiDBLite consensus disorder prediction 1 20 - -
Prci15g0876 738 Coils Coil 386 415 - -
Prci15g0876 738 MobiDBLite consensus disorder prediction 213 229 - -
Prci15g0876 738 Pfam Universal stress protein family 19 164 IPR006016 -
Prci15g0876 738 MobiDBLite consensus disorder prediction 230 248 - -
Prci15g0876 738 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 143 - -
Prci15g0876 738 Coils Coil 326 346 - -
Prci15g0876 738 SUPERFAMILY Protein kinase-like (PK-like) 442 719 IPR011009 -
Prci15g0876 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Prci15g0876 738 SMART serkin_6 460 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0876 738 MobiDBLite consensus disorder prediction 1 16 - -
Prci15g0876 738 Pfam Protein kinase domain 462 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0876 738 Gene3D HUPs 19 165 IPR014729 -
Prci15g0876 738 PANTHER OS02G0152300 PROTEIN 20 732 - -
Prci15g0876 738 Gene3D Transferase(Phosphotransferase) domain 1 533 735 - -
Prci15g0876 738 MobiDBLite consensus disorder prediction 213 248 - -
Prci15g0876 738 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Prci15g0876 738 CDD STK_N 19 167 - -
Prci15g0876 738 ProSiteProfiles Protein kinase domain profile. 460 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0876 738 Gene3D Phosphorylase Kinase; domain 1 436 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0876 Prci-Chr15 5670047 5674087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0876 12 732 Receptor kinase-like Gene Family AT1G78940 51.946 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci15g0876 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0876 - - pcin:129294308 1434.47