Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0871 ATGGATCCAAAGAAATCTAACAAGATCAGAGATATTGTCAGGCTTCAACAGATCCTTAAGAAATGGAGAAAGCTAGCCAACTCTTCAAAAACCAGTGGCAGTAACGGCACTGGCTTCGGCACCGGCACTAGCAGCACCAGCAGCAGTAAAAGCATCAAGTTTCTGAAGAGGACGCTTTCTATATCTGAAAGGGAAGGGGGATCAACCAATGTTGTTCCTAAAGGCTATCTCGCTGTTTGCGTTGGGGAAGAGATGAAGAGGTTTATCATACCTACTGAATATCTGAGCCATCAGGCATTTCACCTGTTACTGAGAGAAGCAGAAGAAGAATTCGGGTTTCAGCAGACTGGTGTTCTGAGAATCCCCTGTGAAGTGCCCGTTTTTGAGAGTATCTTGAAGATGGTGCAGGGAAAGAAGGACAAGTTTAGCACTCAGGAATGCAGACTTAAAGTTGAAGAAATATTGGGACACTGCTCAATAGAAAACCAGCTTGCTTACTCTCATCATCCCCAGAGTCCAATGTGCAGATAG 531 0.4463 MDPKKSNKIRDIVRLQQILKKWRKLANSSKTSGSNGTGFGTGTSSTSSSKSIKFLKRTLSISEREGGSTNVVPKGYLAVCVGEEMKRFIIPTEYLSHQAFHLLLREAEEEFGFQQTGVLRIPCEVPVFESILKMVQGKKDKFSTQECRLKVEEILGHCSIENQLAYSHHPQSPMCR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0871 176 MobiDBLite consensus disorder prediction 26 48 - -
Prci15g0871 176 Pfam Auxin responsive protein 22 135 IPR003676 GO:0009733
Prci15g0871 176 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0871 Prci-Chr15 5625335 5626615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0871 1 176 Calmodulin-binding Proteins AT4G31320 55.155 2.39e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0871 K14488 - gmx:100799598 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0871 15 5625335 5626615 Prci15g0871 15 5625335 5626615 ECH