Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0865 ATGCAAAAAGGGAAGGAATCCAGCAAAGAGGAGAGGGAGAAGATGGAGATGGAAAGGTGTGAAGGGAAAGAGGAAACCCTACCGCCGGGATTTCGATTCCATCCTTCAGATGAAGAGCTTATCACTTACTATCTCATAAACAAGATCTCTGATTCTAGTTTTACAGGAAGAGCAATTGCTGATGTAGATCTAAACAAATGCGAGCCATGGGATCTCCCAGGGAAGGCGAAGATGGGAGAGAAAGAATGGTACTTCTTCAGTCTGAGAGATCGGAAGTACCCGACTGGTGTGAGAACGAATCGAGCAACCAACACAGGCTACTGGAAAACCACAGGCAAAGACAAGGAGATCGTCAACACCGCCACATCGGAGCTCCTCGGCATGAAGAAAACTTTGGTTTTCTACAAAGGCAGAGCCCCAAGAGGCGAGAAAACCAGCTGGGTCATGCATGAATACCGCATTCACTCTAAATCCAACAAGCAAGATGAATGGGTGGTCTGCCGAGTGTTCAAGAAGAGTGGGAGCGTGGTAAAGAAGTACCCTTCCAACCATGCAAGAGGACTGAATCCTTATAGCCTGGACATAGCTGGCCATGGCGGTCCAAGTATTAATATGCCACCACCAATGAACATGATGATGCAGCTGGGAGATCCAGCAGGTCATTTCCTCTACGGAAGGAATAACAATTACACGATGAATTCTGTGCCAAGCAATCCTACTCTGAACCTGCCCATGCAATCCCACTTCAACTATCCTTTGACTGTATCATCAGGAGCTTTCAGTATCTCATCATCATCATCAGGACTTCATGCAGTTACAGGTGGAGAAGCACCCACCTCACAACCCTATTTGCGACCATTCAGTAACCTGCAGGATTTGGGGAGTTCTAACAACATTGTGACACCTGTCATCAGTACTTCTCTCGCTGCAGACAATTTAGGAGACTATGGTGTGGATATGATGAGCATCGTCAATCCTCAGACTCATAGGTATGTGGGCATGGCGGATCACTGTGTGGATCTCGATGCTTACTGGCCTTCCTACTAA 1047 0.4709 MQKGKESSKEEREKMEMERCEGKEETLPPGFRFHPSDEELITYYLINKISDSSFTGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIVNTATSELLGMKKTLVFYKGRAPRGEKTSWVMHEYRIHSKSNKQDEWVVCRVFKKSGSVVKKYPSNHARGLNPYSLDIAGHGGPSINMPPPMNMMMQLGDPAGHFLYGRNNNYTMNSVPSNPTLNLPMQSHFNYPLTVSSGAFSISSSSSGLHAVTGGEAPTSQPYLRPFSNLQDLGSSNNIVTPVISTSLAADNLGDYGVDMMSIVNPQTHRYVGMADHCVDLDAYWPSY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0865 348 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 232 - -
Prci15g0865 348 MobiDBLite consensus disorder prediction 1 31 - -
Prci15g0865 348 FunFam NAC domain-containing protein 100-like 36 176 - -
Prci15g0865 348 ProSiteProfiles NAC domain profile. 27 172 IPR003441 GO:0003677|GO:0006355
Prci15g0865 348 SUPERFAMILY NAC domain 24 172 IPR036093 GO:0003677|GO:0006355
Prci15g0865 348 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Prci15g0865 348 Gene3D NAC domain 36 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0865 Prci-Chr15 5559966 5562350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0865 13 348 NAC Transcription Factor Family AT2G24430 47.458 7.30e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci15g0865 NAM 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0865 - - gmx:100804931 408.297