LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci15g0833	ATGGCCTTCATATCAGAGGGGACAGGCATATATGTTTTTGAGTTTTTGTTAAGCCTCAAGAAGGAAGAGGCTGAAATTCAAGTATTAGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAATATTGTGAGTGCTTCCAAGCTAATGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAAGTGCTCTTGATCCAATTAACCTCAAACAGGAAATATTTTCTGGCAAAGCTGCCATAGATCAAACTGTTTTGACCGCTCCATTTCAACAGGAAAATGATCCAGTGGTTGCGACACCTGCTCCGTTTGCGTCTGTTGCGTCTGACATTGGCCATGCAACAAATCCAGGGTCTTCAAGATCAACATACAGGTCACCATTGGCGGATGCCCTCATGCCAGAGGATGTGAAATATCTCTGTTCACTTTTTGTTGTTCTATCAGGAGTAGCCGCAAAGACATATGCAGAGTCAGGAGGCAGGGTAGACCAGCAAACGGAGATCAAGAAATTTGAAGCTTCTGTTGCTTCATCAGCTGAATTACTGCAAGATAATGAAGAAGTCCACAAGCCTGTTTTGATGATCATGCAGAGAAAAATGGAGCAGAGAGAAGTGGAACTATTGATTCTGGATCAGATGGAGTTGATATACAGAACTACGGGAGGCCATTGTCACCAGGAACGCTAG	726	0.427	MAFISEGTGIYVFEFLLSLKKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSEERSALDPINLKQEIFSGKAAIDQTVLTAPFQQENDPVVATPAPFASVASDIGHATNPGSSRSTYRSPLADALMPEDVKYLCSLFVVLSGVAAKTYAESGGRVDQQTEIKKFEASVASSAELLQDNEEVHKPVLMIMQRKMEQREVELLILDQMELIYRTTGGHCHQER	241

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci15g0833	241	PANTHER	TESMIN/TSO1-RELATED	23	202	IPR028307	-
	Prci15g0833	241	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	34	68	IPR005172	-
	Prci15g0833	241	SMART	CXC_2	31	72	IPR033467	-
	Prci15g0833	241	ProSiteProfiles	CRC domain profile.	1	71	IPR005172	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci15g0833	Prci-Chr15	5333332	5337445	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci15g0833	20	193	CPP Transcription Factor Family	AT4G29000	44.651	3.87e-40	144

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Prci15g0833		TCR	6.9e-13	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci15g0833	-		K21776	pcin:129294593	486.878