Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0815 CGCACTCTCTCTTTCTCCCCTGACTCTCTTCAAAGCCTGCTTGCATCTCAACATATAGTCATAAACTTGTTCTTTGGAAACTACTATGACTGCAGAATCCAGAATTCTGAAACCGAGAGCACCTCAAACTCAAGCTCATTCCCATCTTCCCCGACCTCGCCACACTCTCCTCCTTCAGCCCTGCCTCACCAAAACTCTGTTTCACAAGCTAAAGCTGCGAGCCCAGAATCCAGAAAAGTGAAACGAATTCGAGACTCCAGCAAGCACCCAGTTTATCGCGGGGTCCGCATGCGAAATTGGGGTAAATGGGTCTCTGAAATTCGCGAGCCTCGCAAGAAATCCCGCATATGGCTCGGTACATTTCCGACGCCCGAAATGGCAGCGAGAGCGCATGACGTGGCCGCTTTGAGCATCAAAGGCAGTTCTGCTATTCTCAATTTCCCCGAGCTGGTCAACCTGCTTCCTCGTCCCGTCTCGCTCTCCCCCCGAGATGTGCAGGCGGCGGCGGCGAAAGCTGCACAGATGGATAAGTTCGACCGGCCGACATCCTCGTCCTCGTCTTCGCTGTCGTCGCTGGTCTCGGCAATGGACTTGGGTACAGAATCGGAGGAACTGAGCGAGATAATAAAGCTGCCGAACTTGGAAACGAGCAACGACGCGATGGAACTGGTGAAGGAGTTCGTGTACATGGACTCGGAAGAGAGATGGATGTACGAGCCACCGTGCTTACAGAGCATGGAGGACTGCGAGGGTTATGTCGCCAATCAGCTGTGGAATAACTAA 783 0.53 RTLSFSPDSLQSLLASQHIVINLFFGNYYDCRIQNSETESTSNSSSFPSSPTSPHSPPSALPHQNSVSQAKAASPESRKVKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPELVNLLPRPVSLSPRDVQAAAAKAAQMDKFDRPTSSSSSSLSSLVSAMDLGTESEELSEIIKLPNLETSNDAMELVKEFVYMDSEERWMYEPPCLQSMEDCEGYVANQLWNN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0815 260 FunFam Ethylene-responsive transcription factor 2 90 149 - -
Prci15g0815 260 Gene3D AP2/ERF domain 91 150 IPR036955 GO:0003700|GO:0006355
Prci15g0815 260 MobiDBLite consensus disorder prediction 59 73 - -
Prci15g0815 260 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 CDD AP2 92 150 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 58 222 - -
Prci15g0815 260 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 SMART rav1_2 91 154 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 MobiDBLite consensus disorder prediction 39 88 - -
Prci15g0815 260 Pfam AP2 domain 90 140 IPR001471 GO:0003700|GO:0006355
Prci15g0815 260 SUPERFAMILY DNA-binding domain 91 149 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0815 Prci-Chr15 5246826 5247871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0815 65 252 AP2-EREBP Transcription Factor Family AT5G11590 63.317 7.15e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci15g0815 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0815 K09286 - qsa:O6P43_015497 287.73