Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0798 ATGATGGCGGTGAGTTCTGGGTGTAAAGAGGGAAGCAAGGTGGGAATGGAGAACGGCAAGTATGTGCGGTACACGCCGGAGCAGGTTGAAGCTCTGGAGAGGCTTTATCACGAATGCCCTAAACCCAGTTCCATGCGTCGCCAGCAGCTCATCAGAGAATGCCCCATTCTCTCCAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGCGGAAGGAATCATTAAGCCTACAATCTGTGAACAGGAAGCTGACGGCCATGAATAAACTACTCATGGAGGAAAATGAGAGATTGCAGAAGCAAGTGTCACGGCTGGTTTATGAGAACAGCTTTTTCCGCCAGCAGACACAGAATGCGACCCTTGCTACGACGGACACAAGCTGTGACTCGGTGGTGACCAGTGGTCAGCACCATGTGACAACTCAGCATCCCCCAAGGGATGCCAGCCCTTCTGGACTTTTGTCCATTGCAGAGGAGACCTTAGCAGAGTTTCTATCGAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTGTCATGATTGCCCTGGAGTGGCAGCACGAGCTTGCGGCCTCGTGGGTCTGGAACCTACAAGGGTTGCAGAAATACTCAAAGATAGGCCCTCGTGGTTTCGTGATTGCCGAGCCTTGGATGTTCTGAATGTGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTATATGCAGTTGTATTCGCCAACAACTTTGGCACCTGCTCGTGACTTCTGGTTGCTGCGCTACTCATCTGTTTTGGAGGATGGGAGTCTAGTGGTCTGTGAGAGATCACTTAACAACACCCAGAATGGACCGACAGTGCCCCCAGTGCAGCACTTTGTTAGGGCAGACATGCTGCCTAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATTATTCATATTGTTGATCATATGGATCTAGAGGCCTGGGGTGTTCCTGAAGTGTTGCGCCCACTTTATGAGTCATCAACACTACATGCTCAAAAGACGACAATGGCGGCCTTGCGTCATTTGAGGCAGATTTCTCAAGAGGCTTCTCAACCAAATGTCTCTGGCTGGGGGAGGAGGCCTGCAGCTCTACGTGCACTTAGTCAGCGATTGAGCAAGGGATTCAATGAAGCTGTCAATGGGTTTGCAGATGATGGCTGGTCCATTTTGGAAAGCGATGGCATTGATGATGTAACCCTTCTGGTGAATCCATCTCCTAACAAGATGGCGGGAGTAAATTTTATTCAGAGCAATGGATTTCCTTGTATGAGCAGTTCTGTTCTATGTGCCAAAGCATCAATGCTGTTACAGAATGTCCCTCCAGCAATTCTTCTCAGATTCTTGCGAGAGCACCGGTCAGAGTGGGCTGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGCTTGCCTGGGGCCCGGGCAGGAAGTTTTGGGGGTCAGGTTATTCTGCCACTGGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAACTTGAAAACATGGGTTACTATAGGGATGACATGACAATACCTGAGGACGTTTTCCTCTTGCAACTTTGTAATGGAGCAGATGAGCATGCAAATGGTACATATGCAGAGCTCATTTTTGCCCCTATTGATGCATCTTTCTCTGACGATGCACCTATTTTACCTTCTGGTTTTCGCATCATAGCTGTCAATTCTAACTTGGATGCTGCAAGTTCAAACCGTACACTTGATCTTGCTTCTTCTCTTGAAGTTAAAACCACAGCAAACAAAGCAGGCAGTGACAATAATGGTAGCTTGGGGAATACAAAATCTGTGATGACAATGGCATTCCAGTTCGCATTTGAAGTGCACCTTCAGGATAGTGTAGCCTCCATGGCCCGGCAGTATGTCCGCAGTATCATTGCATCTGTTCAAAGGGTTGCATTAGCACTCTCCCCTTTGCAATTTGGTTCTCGTAGTGGTTTGCATGCGCCACCTGGCCCTCCTGAGGCACAAACACTTGCTCGTTGGATCTGTCAAAGCTATAGATGCTATCTAGGGGTAGAACTGCTAAAAAGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGGTCATGTGCTGCTCTTTAAAGGCATTACCCACTTTCACATTCGCTAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTGGCTCTACAAGACATAACTCTGGAAAAAATATTTGACGACAGTGGAAAGAGAATCCTGTACTCAGAGTTCCCACATATAATGCAGCAGGGTTTTATGTGCATGCAAGGTGGCATCTGCTTATCTAGCATGGGGAGGCCAGTGTCCTATGAGAGAGCAGTGGCATGGAAAGTGTCGAACGAAGAAGAAATGGCCCAATGCATTTGTTTTATGTTCATCAACTGGTCTTTTGTTTGA 2520 0.479 MMAVSSGCKEGSKVGMENGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESLSLQSVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNATLATTDTSCDSVVTSGQHHVTTQHPPRDASPSGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAICHDCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDVLNVMPTGNGGTIEMLYMQLYSPTTLAPARDFWLLRYSSVLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEAWGVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSILESDGIDDVTLLVNPSPNKMAGVNFIQSNGFPCMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARAGSFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPEDVFLLQLCNGADEHANGTYAELIFAPIDASFSDDAPILPSGFRIIAVNSNLDAASSNRTLDLASSLEVKTTANKAGSDNNGSLGNTKSVMTMAFQFAFEVHLQDSVASMARQYVRSIIASVQRVALALSPLQFGSRSGLHAPPGPPEAQTLARWICQSYRCYLGVELLKSEGSESILKSLWHHSDAVMCCSLKALPTFTFANQAGLDMLETTLVALQDITLEKIFDDSGKRILYSEFPHIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVSNEEEMAQCICFMFINWSFV 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0798 839 CDD bZIP 72 111 - -
Prci15g0798 839 Gene3D - 198 379 IPR023393 -
Prci15g0798 839 ProSiteProfiles START domain profile. 154 368 IPR002913 GO:0008289
Prci15g0798 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 839 IPR044830 GO:0003700
Prci15g0798 839 SUPERFAMILY Bet v1-like 163 375 - -
Prci15g0798 839 Gene3D - 12 85 - -
Prci15g0798 839 Pfam MEKHLA domain 698 838 IPR013978 -
Prci15g0798 839 Pfam START domain 164 372 IPR002913 GO:0008289
Prci15g0798 839 SMART START_1 163 373 IPR002913 GO:0008289
Prci15g0798 839 SUPERFAMILY Homeodomain-like 19 82 IPR009057 -
Prci15g0798 839 Coils Coil 85 116 - -
Prci15g0798 839 CDD START_ArGLABRA2_like 158 373 - -
Prci15g0798 839 FunFam Homeobox-leucine zipper protein REVOLUTA 20 75 - -
Prci15g0798 839 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Prci15g0798 839 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Prci15g0798 839 CDD homeodomain 20 80 IPR001356 GO:0003677
Prci15g0798 839 SMART HOX_1 17 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0798 Prci-Chr15 5134070 5142205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0798 16 839 Homeobox Transcription Factor Family AT4G32880 78.261 0.0 1350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci15g0798 START 1.9e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0798 K09338 - zju:107420449 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0798 15 5134070 5142205 Prci15g0798 15 5134070 5142205 ECH