Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0797 ATGGCCAAAGGAGTTCATCAAACGTTTCCAAAGTCCCTCACGTTCATGTGCCTCGTTATTCTGGTGTTCAACCTTCGCTCCTCACAGTCACATGGAGATCATGAGCAACTGGAAATTCAGCTTCTGTTATCCTTTAAAGCTTCTGCCATGGACCCACGTCAGTCTCTTTCCAACTGGCTCAATTCTTCAGCCTCCTTCTGTAACTGGTATGGCCTCACCTGCGATCACAGCTCTTCTCACGTTAACTCCATACAACTCTCAGGTAAAAACATGTCCGGCACGATTTCCTCATCCATATTTCAACTCCCGAACGTTACAAATATCGACCTCTCCAGCAATCAGTTCGCTGGTGAACTATCTTTCTCGTTCCATTCGTCTCTGTCGTCACTCCGTTACCTTAATCTTAGCAACAACAACCTAACGGGTTCGTTGCCTGAGTTTTTATTTTCTGTCTCGTTTTCCCACCTGGTATCCTTGGATCTTTCAAACAACATGTTTTCCGGGACGATTCCTTATCAAGTTGGTTTGCTTCCTGGGCTGAAATATCTTGACGTCGGCGGAAACGTTCTGGTGGGAGGAATTCCAAATTCCATCACCAATATCACAGGTTTGGAATATTTGACATTGGCTTCGAACCAGTTAGTGGGCGAAATCCCACGTGACATAGGTGTAATGAAGAGCTTGAAGTGGATTTACTTGGGTTACAACAACCTCTCCGGAGAAATCCCAAAGAGCATAGGAAACTTGTTGTCTCTGCAACATCTCGACCTCGTTTACAACAATCTCACGGGATTCATTCCCGAGTCTCTTGGAAACCTCACCAATCTTGAGTTCCTGTTTCTCTACAAAAACAACCTCGCAGGCCCAATCCCACCTTCCATTTTCGACATGAAAAAGCTTGTTTCGCTTGATCTCAGTGATAATTCTCTTTGGGGAGAGATTCCTGAACTTGTGATTAATCTTCAGAGCCTGGAGATTCTTCAGCTTTTCTCAAACAACTTTACCGGAAAGATTCCGAGGGCCTTAGCAACTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACAGGCTAACGGGCGAGATTCCAAAAGAACTGGGAATGCATAACAACCTCACTGTTTTAGACCTCTCCACCAATCAGCTTTCAGGAGAGATCCCCCATGGTTTATGTGACTCGCGCAATCTTTACAAGCTCATTCTCTTCTCCAACGCTCTTGAAGGAGAAATCCCCCACAGTTTGAGCTCTTGCACAAGCCTACGGCGAGTGCGCCTCCAGAACAACAAACTGTCCGGCCAGTTACCGTCGGAACTCACCAAACTGCCGCAGGTATACTTGTTAGACATGTCTGGCAATAAACTTTCCGGGAGGATCAATGATAGGAAGTGGGACATGCCGGCGCTTCAATTTCTGAACTTGGCTAAAAACAAATTCTCAGGAGAATTACCCAACTCTTTCGGTAACGAACTGGAGAACCTGGACTTATCGGAGAACCTTTTTTCGGGTTACATTCCACCTGGTCTGGGAAGCTTACAAGAGCTCGTGCAGTTGAAGCTTAGCAGAAACAGGCTTGCCGGTAGCATCCCAAATGAACTTTGTTCGTGCAAGAAGCTTGTGTCTTTAGACCTCAGTCACAATCAACTTAGCGGGCAAATACCCGTAAGTCTCGGCGAGATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCAATTGTCAGGTGAAATTCCTGAAAGTTTAGGAAGCGCGGAATCCCTCGTAGAACTCAACGTATCCTACAACCATTTTCATGGGAGATTGCCGTCCACAGGAGCTTTCCTTGCCATCAACGTCAGCGACGTCGCTGGGAATGACCTTTGTGAGAGTTATAGTGACAGTAGAAGCGGTTTGCCGCCCTGCGCAAATAGAGAAGATAATAAGAACCCATTTTGGTGGTTTTTTCTGTTTGGTCTTGTTGGGTTCCCGCTCGCTGCTTCTCTCATTGTCTTCATACGCAGAAGACAGAACTTGGAGGTGATCAGAAGGGTGGAAAATGAAGACGACACATGGGAAATGCGCTACTTTGACTCCAAGGCATCAAAACTCGTCACCATCCACGATGTGTTATCTTCTGCAAAAGAAGGAGTCATAATCACTAAAGGACGAAAAGAGACAATGCAATTCGAGGTGAAAGAGATGAGTGACTTGAATTGCTTTTGGGAAGACATTGGTAAGCTTCGGCACCCAAACATGGTTCAGCTGAAGGGAATATGCAGGTGCGGGAAAGGAGGGTACTTGTTATACGAATATGTGGAGGGAAAATATTTAAGCGACGTCGTTGTAAGTTTAAGCTGGGAACGACGAAGGAATATTGCGCATGGAATTGCAAAAGCACTGAAGTATTTGCATGCTCATGGTTCACCGTTTTCTTTGGTAGGCGAGATGTCACCACAGAGAATTTTGGTGGACGGAAAAGATGTTCCTCGTCTCGTGTTGCGCCCTCTGAAGGCTTCCATTTCTTCACCTTACGCTGCTCCAGAATCAAGGAACGAGAAGGAGGTGACTGAGAAGAGTGACATATACGCATTCGGGGTTATTCTGATAGCGTTATTGACGGGAAGAAGCTCAGTGGACGCAGAAGTGGGCATGCAGCACGAGAGCATTGTGGAGTGGGCCCGTTATTGTTATTCGGACTGTCATCTGGATACATGGGTCGACCCTGTCATGAAGGGCGGCATATCATCGGCAGCTCAAAACGACATCGTTGAGATGATGAACCTGGCCCTCCAATGCACGGCCACTGATCCCACAGCTAGGCCGAGCGCGAACCACGTGTTCAAAACCCTACACGCCCTGTCAGCTTCCGCATCGTCCCGTGTTTAA 2862 0.4686 MAKGVHQTFPKSLTFMCLVILVFNLRSSQSHGDHEQLEIQLLLSFKASAMDPRQSLSNWLNSSASFCNWYGLTCDHSSSHVNSIQLSGKNMSGTISSSIFQLPNVTNIDLSSNQFAGELSFSFHSSLSSLRYLNLSNNNLTGSLPEFLFSVSFSHLVSLDLSNNMFSGTIPYQVGLLPGLKYLDVGGNVLVGGIPNSITNITGLEYLTLASNQLVGEIPRDIGVMKSLKWIYLGYNNLSGEIPKSIGNLLSLQHLDLVYNNLTGFIPESLGNLTNLEFLFLYKNNLAGPIPPSIFDMKKLVSLDLSDNSLWGEIPELVINLQSLEILQLFSNNFTGKIPRALATLPRLQVLQLWSNRLTGEIPKELGMHNNLTVLDLSTNQLSGEIPHGLCDSRNLYKLILFSNALEGEIPHSLSSCTSLRRVRLQNNKLSGQLPSELTKLPQVYLLDMSGNKLSGRINDRKWDMPALQFLNLAKNKFSGELPNSFGXNELENLDLSENLFSGYIPPGLGSLQELVQLKLSRNRLAGSIPNELCSCKKLVSLDLSHNQLSGQIPVSLGEMPVLGMLDLSENQLSGEIPESLGSAESLVELNVSYNHFHGRLPSTGAFLAINVSDVAGNDLCESYSDSRSGLPPCANREDNKNPFWWFFLFGLVGFPLAASLIVFIRRRQNLEVIRRVENEDDTWEMRYFDSKASKLVTIHDVLSSAKEGVIITKGRKETMQFEVKEMSDLNCFWEDIGKLRHPNMVQLKGICRCGKGGYLLYEYVEGKYLSDVVVSLSWERRRNIAHGIAKALKYLHAHGSPFSLVGEMSPQRILVDGKDVPRLVLRPLKASISSPYAAPESRNEKEVTEKSDIYAFGVILIALLTGRSSVDAEVGMQHESIVEWARYCYSDCHLDTWVDPVMKGGISSAAQNDIVEMMNLALQCTATDPTARPSANHVFKTLHALSASASSRV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0797 954 FunFam Leucine-rich repeat receptor protein kinase EMS1 152 243 - -
Prci15g0797 954 FunFam Leucine-rich repeat receptor-like kinase 37 151 - -
Prci15g0797 954 Gene3D Ribonuclease Inhibitor 35 194 IPR032675 -
Prci15g0797 954 SMART LRR_typ_2 153 177 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 273 297 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 201 225 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 345 369 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 465 488 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 512 536 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 560 584 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 127 151 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 371 393 IPR003591 -
Prci15g0797 954 SMART LRR_typ_2 249 272 IPR003591 -
Prci15g0797 954 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Prci15g0797 954 Gene3D Ribonuclease Inhibitor 285 343 IPR032675 -
Prci15g0797 954 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 330 - -
Prci15g0797 954 PANTHER RECEPTOR-LIKE PROTEIN 55 403 944 - -
Prci15g0797 954 Gene3D Ribonuclease Inhibitor 195 284 IPR032675 -
Prci15g0797 954 Pfam Leucine Rich Repeat 129 147 IPR001611 GO:0005515
Prci15g0797 954 Gene3D Ribonuclease Inhibitor 344 629 IPR032675 -
Prci15g0797 954 ProSiteProfiles Leucine-rich repeat profile. 129 151 IPR001611 GO:0005515
Prci15g0797 954 SUPERFAMILY L domain-like 369 623 - -
Prci15g0797 954 Gene3D Transferase(Phosphotransferase) domain 1 728 952 - -
Prci15g0797 954 ProSiteProfiles Protein kinase domain profile. 659 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0797 954 SUPERFAMILY L domain-like 51 386 - -
Prci15g0797 954 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 331 630 - -
Prci15g0797 954 Pfam Protein kinase domain 738 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0797 954 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515
Prci15g0797 954 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
Prci15g0797 954 Pfam Leucine rich repeat 227 286 IPR001611 GO:0005515
Prci15g0797 954 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Prci15g0797 954 SUPERFAMILY Protein kinase-like (PK-like) 737 945 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0797 Prci-Chr15 5126380 5130527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0797 38 944 Receptor kinase-like Gene Family AT2G25790 51.459 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Prci15g0797 Pkinase 3.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0797 - - gmx:100777118 1184.86