Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0792 ATGCCTGAGCTGCGTCGCAGACCACGCAGAGACCGGGCATTAGATAATCCGAACCCAAGTCCGATTGCAGCACTGGACAAGCCCTCGCCAAGAACTCGCCAGAGAAGATCCACTGCGCAGAACAAGCCAAATCGGAAGCATAAGAACGCGATCGCAGCTGATGAAACAAATAATAATCTAAACAAGAACGTCGGCGCCGTTCCTCTGACCGGGACATTGAAAGGCGAGGAAGAAGGACAAGCGCCAGTCGCACCGTTAAGGGTTTTGAGACAGAAAGCTGGGAAAAAGGCCATGGATGAGTACGACAGCGGTGGTCGAAGCCCCGACAAGGCTCCGGCCGCTGAAGACGAGGGCAATACAGCTCCCCTTCCTGAGAAGGTCCAGGTTGGTGGTTCTCCACCGTATAGAGTCGATAGAAAATTAGGGAAAGGTGGATTTGGACAGGTCTATGTTGGCAGGCGTGCAGGAGCTACAAATTGCAATGAACGAACTGGGCCTGGAGCCGTTGAAGTAGCTTTAAAGTTCGAGCATAGAAGTAGCAAAGGGTGTAATTACGGTCCGCCATACGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCACGGTGTTCCACGAGTTCATTACAAGGGGCGTCAGGGTGACTACTATGTTATGGTCATGGATATGCTCGGCCCTAGTCTATGGGATGTATGGAATAACAACTCGCACACGATGTCTACAGAAATGGTGGCATGCATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCCAGAGGATATGTGCATGGTGATGTGAAACCTGAGAATTTTCTGCTTGGTCCCCCTGGAACTCCGGATGAGAAAAGGCTTTTTCTGGTTGACCTTGGATTAGCAACCCGGTGGCGTGACCATACGACTGGAGTTCATGTTGAGTATGATCAACGACCAGATGTATTTAGGGGGACCGTACGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAGTCTCTTGCTTACACTCTCATCTTCCTTCTTCGTGGTCGATTACCTTGGCAAGGATATCAGGGAGAGAATAAAGGATTTCTTGTCTGCAAGAAGAAGATGGCCACTTCCCCTGAAACTTTATGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAGCATGTGGTGAATTTGAAGTTTGATGAGGAACCTAACTATGCGAAGTATGTTTCCCTCTTTGATGGTATTGTTGGTCCAAATCCGGACATCAGGCCAATAAATACTGATGGTGCTCAGAAGCTTATATGTCAGGTTGGCCATAAGAGAGGGCGATTGACCATGGAAGAGGATGATGATGAACAACCAAAAAAGAAGGTCAGAATGGGAATGCCAGCAACCCAATGGATCAGTGTTTATAATGCTCGCCGACCAATGAAGCAAAGGTATCATTACAATGTGGCTGATATGCGGCTGCCCCAACACATAGAGAAAGGGAATGAGGATGGTTTGTTTATCAGCAGTGTGGCTTCTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCAGTGCACAAGTTTATGAACTTTCTCCTCACTTTCTTCACAAGGAATGGATTATGGAGCAATGGGAGAAGAATTACTACATTAGTGCAATAGCAGGAGCTAATAATTGTAGTTCATTGGTTGTAATGTCCAAAGGGACCCAGTACTTACAGCAGTCATATAAAGTCAGTGATTCATTTCCGTTCAAGTGGATCAATAAAAAATGGAGAGAAGGGTTTTACGTCACTAGCATGGCCACTGCTGGGAGTAGATGGGCAATTGTCATGTCCCGTGGTGCGGGATTTTCAGACCAGGTTGTAGAACTTGATTTCCTATATCCCAGTGAAGGTATTCATCGTAGGTGGGACAGTGGTTACCGCATCACATCAACTGCAGCAACTTGGGACCAAGCTGCCTTCGTTCTTAGTGTACCAAGAAGGAAACCAGCTGATGAAACTCAAGAGACACTTCGGACTTCTGCTTTCCCTAGTACTCATGTTAAGGAAAAATGGGCAAAGAACCTGTACATTGCATCTATTTGTTATGGAAGAACAGTTTCATGA 2109 0.4656 MPELRRRPRRDRALDNPNPSPIAALDKPSPRTRQRRSTAQNKPNRKHKNAIAADETNNNLNKNVGAVPLTGTLKGEEEGQAPVAPLRVLRQKAGKKAMDEYDSGGRSPDKAPAAEDEGNTAPLPEKVQVGGSPPYRVDRKLGKGGFGQVYVGRRAGATNCNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKRLFLVDLGLATRWRDHTTGVHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEHVVNLKFDEEPNYAKYVSLFDGIVGPNPDIRPINTDGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLPQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNCSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0792 702 Pfam Protein kinase domain 135 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0792 702 SUPERFAMILY Protein kinase-like (PK-like) 134 417 IPR011009 -
Prci15g0792 702 Gene3D Transferase(Phosphotransferase) domain 1 104 458 - -
Prci15g0792 702 SMART serkin_6 135 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0792 702 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0792 702 FunFam casein kinase 1-like protein HD16 108 458 - -
Prci15g0792 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Prci15g0792 702 ProSitePatterns Protein kinases ATP-binding region signature. 141 174 IPR017441 GO:0005524
Prci15g0792 702 MobiDBLite consensus disorder prediction 92 113 - -
Prci15g0792 702 CDD STKc_CK1 135 411 - -
Prci15g0792 702 PANTHER CASEIN KINASE-RELATED 129 668 - -
Prci15g0792 702 MobiDBLite consensus disorder prediction 92 138 - -
Prci15g0792 702 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0792 Prci-Chr15 5071488 5078847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0792 137 411 MAP Kinase Kinase Kinase AT5G50180 24.490 1.39e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci15g0792 Pkinase 6.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0792 - - zju:107420390 1239.17