Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0740 ATGGAACTCTGTGAACATGATCATTTTTTGGAAGAATTACTGGCCGTGAGAAGGGAAACATGGGACGCCATCCCATCCGAATCAAACCAACTCTTCTCTAATGGCTGGGGTTTTGATGGTTTTGATCAAAACTCTCTACCTTTTCTTCCAAACTCTTCCTGTCAAGAAATTCCTCAGAGTTACCCCAACAACTACGCCTTCAATGAAATCTACAGTTCCTTGCTTGATGAATTCTCTGCTCCCCAGAATGTTGATTCGTCTTCTTCATCATATAACGTTCTTGACACTCCTGTTCTGGGTCAAGAAGATTACCCATTGTCCATGATGGAGGAATTGGACGATCCGGGTTTACTTGGAGATGAACTCCAGAGTTTGGACCTGCAAGCCCCATGCAAAATAGAGCCAAGTCAGTCCCCTGAAATGCCAATTTTCAACATGGGTGATGCGTCTTTGGAAAGAAAGAATCGAGCAAAGAAGCTTCAGGGCCAACCCTCCAAGAATCTAATGGCTGAGAGGAGGAGAAGGAAGAGGTTAAATGATCGCCTTTCAATGCTGAGATCAATTGTCCCCAAGATAAGTAAGATGGACAGAACATCTATCCTCGGAGACACTATAGACTACATGAAAGAACTCCTGGAGAAGATCAACAAATTGCAAGAAGAATTAGAGGTGGATTCAAACATGGGGGGCATTTTGGAGGATGCAAAGCAAAATGAAATCTTGGTGAGAAATACACCCAAGTTTGAAGTGAAGAGGAGGAATGAGGACACACAGATTGAAATTTGCTGTGCAGGAAAGCCAGGACTGTTGCAATCTACAATGAACACTCTGGAAGCATTTGGTCTTGAGATTGAACAATGTGTGATAAGTTGTTTCAATGATTTCACTGTGCACGCTTCTTGCTCTGAGGAATCGGAGCAGAGTACAGTACTGAGTTGTGAAGATATAAAGCAAGCGCTATTTAGGAGCGCAGGGTATGGGGGAAGATGTTTGTAG 996 0.4327 MELCEHDHFLEELLAVRRETWDAIPSESNQLFSNGWGFDGFDQNSLPFLPNSSCQEIPQSYPNNYAFNEIYSSLLDEFSAPQNVDSSSSSYNVLDTPVLGQEDYPLSMMEELDDPGLLGDELQSLDLQAPCKIEPSQSPEMPIFNMGDASLERKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINKLQEELEVDSNMGGILEDAKQNEILVRNTPKFEVKRRNEDTQIEICCAGKPGLLQSTMNTLEAFGLEIEQCVISCFNDFTVHASCSEESEQSTVLSCEDIKQALFRSAGYGGRCL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0740 331 Coils Coil 201 228 - -
Prci15g0740 331 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 76 326 - -
Prci15g0740 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Prci15g0740 331 SMART finulus 168 217 IPR011598 GO:0046983
Prci15g0740 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 224 IPR036638 GO:0046983
Prci15g0740 331 Pfam Helix-loop-helix DNA-binding domain 168 211 IPR011598 GO:0046983
Prci15g0740 331 Gene3D - 151 226 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0740 Prci-Chr15 4790140 4792143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0740 143 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 65.263 5.41e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci15g0740 HLH 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0740 - - gmx:100814388 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0740 15 4790140 4792143 Prci15g0740 15 4790140 4792143 ECH