Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0739 ATGGAACTCTGTGAACATGATCATTTTTTGGAAGAATTACTGGCCGTGAGAAGGGAAACATGGGACGCCATCCCATCCGAATCAAACCAACTCTTCTCTAATGGCTGGGGTTTTGATGGTTTTGATCAAAACTCTCTACCTTTTCTTCCAAACTCTTCCTGTCAAGAAATTCCTCAGAGTTACCCCAACAACTACGCCTTCAATGAAATCTACAGTTCCTTGCTTGATGAATTCTCTGCTCCCCAGAATGTTGATTCGTCTTCTTCATCATATAACGTTCTTGACACTCCTGTTCTGGGTCAAGAAGATTACCCATTGTCCATGATGGAGGAATTGGACGATCCGGGTTTACTTGGAGATGAACTCCAGAGTTTGGACCTGCAAGCCCCATGCAAAATAGAGCCAAGTCAGTCCCCTGAAATGCCAATTTTCAACATGGGTGATGCGTCTTTGGAAAGAAAGAATCGAGCAAAGAAGCTTCAGGGCCAACCCTCCAAGAATCTAATGGCTGAGAGGAGGAGAAGGAAGAGGTTAAATGATCGCCTTTCAATGCTGAGATCAATTGTCCCCAAGATAAGTAAGATGGACAGAACATCTATCCTCGGAGACACTATAGACTACATGAAAGAACTCCTGGAGAAGATCAACAAATTGCAAGAAGAATTAGAGGTGGATTCAAACATGGGGGGCATTTTGGAGGATGCAAAGCAAAATGAAATCTTGGTGAGAAATACACCCAAGTTTGAAGTGAAGAGGAGGAATGAGGACACACAGATTGAAATTTGCTGTGCAGGAAAGCCAGGACTGTTGCAATCTACAATGAACACTCTGGAAGCATTTGGTCTTGAGATTGAACAATGTGTGATAAGTTGTTTCAATGATTTCACTGTGCACGCTTCTTGCTCTGAGGAACAGGAATCGGAGCAGAGTACAGTACTGAGTTGTGAAGATATAAAGCAAGCGCTATTTAGGAGCGCAGGGTATGGGGGAAGATGTTTGTAG 1002 0.4331 MELCEHDHFLEELLAVRRETWDAIPSESNQLFSNGWGFDGFDQNSLPFLPNSSCQEIPQSYPNNYAFNEIYSSLLDEFSAPQNVDSSSSSYNVLDTPVLGQEDYPLSMMEELDDPGLLGDELQSLDLQAPCKIEPSQSPEMPIFNMGDASLERKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINKLQEELEVDSNMGGILEDAKQNEILVRNTPKFEVKRRNEDTQIEICCAGKPGLLQSTMNTLEAFGLEIEQCVISCFNDFTVHASCSEEQESEQSTVLSCEDIKQALFRSAGYGGRCL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0739 333 Coils Coil 201 228 - -
Prci15g0739 333 Gene3D - 151 226 IPR036638 GO:0046983
Prci15g0739 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Prci15g0739 333 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 76 328 - -
Prci15g0739 333 SMART finulus 168 217 IPR011598 GO:0046983
Prci15g0739 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 224 IPR036638 GO:0046983
Prci15g0739 333 Pfam Helix-loop-helix DNA-binding domain 168 211 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0739 Prci-Chr15 4790132 4792143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0739 143 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.583 5.20e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci15g0739 HLH 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0739 - - gmx:100814388 465.692