Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0720 CCACATTTGCAGTTTAGACAGTATGGCTTGTGGGAAAGATATACAGATCTATACCCAAAGGAAGACCTGGTTTATACAGTCGGTGAGAGTGAATATGGGAAAGACTGGTTCTTCGCACAAGTCACCAGGAAGAAAGATGATGGAACTTACCAAGGAACGACATGGCAAATTAAGTTCAAGCTAGACGACGTGATGGGAGGTGGGACGTACAAGTTACGATTGGCTCTTGCAACTGCAAATGCAGCCGAATTACAGGTTAGAGTGAATGATCTGAAGCAAGACCCTCCTGTATTCACGAGTGCTATTAAATGA 312 0.4391 PHLQFRQYGLWERYTDLYPKEDLVYTVGESEYGKDWFFAQVTRKKDDGTYQGTTWQIKFKLDDVMGGGTYKLRLALATANAAELQVRVNDLKQDPPVFTSAIK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0720 103 Coils Coil 74 94 - -
Prci15g0720 103 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 4 101 - -
Prci15g0720 103 Gene3D - 3 103 - -
Prci15g0720 103 SUPERFAMILY Galactose-binding domain-like 5 101 IPR008979 -
Prci15g0720 103 Pfam Polysaccharide lyase family 4, domain III 15 90 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0720 Prci-Chr15 4650910 4651446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0720 4 102 Polysaccharide Lyase AT4G24430 67.327 3.18e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0720 K18195 - pcin:129294579 218.009