Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0673 ATGGAAGGTGACTATTCATCATTCGTTACCAGCCCCGGAGGCACCGTAGAGGTGGCCAAGAAACCGAAAGGCCGCCCTAAAGGCTCCAAAAACAAGCCCAAGGCCTCTCGTCCTCTCGTACCCGGCGACGACGTGATGATGACGCCTTACGTTCTCGAAGTCCCTCACGGCAACGACGTCGTCCAGGCTATTTCCCGGTTCAGCTTCCGCCAGAACACCGGCCTCTGCGTCCTCACTGCTTCCGGCACCGTCGTTAACGCCTCCCTCTGCCTCTCCTCCGCCGCCTCCACTCCTGACATCGCTTGTCCCGGCCACCACGCCATCCTCTCCATGTCCGCCGCATTCGGCCCTCGCCAATGCCCCACTTCGGGTTACGCCGCCAAACCCCTCACCGTCAGCCTCGCCGCCCCTAACGGCCACGTCATCGGAGGGCTGGTATTCGGCGGTTTGGTCTCAGTGGGCCCGGTCTACGTGATAGCAACTTCATTCAACAGCCCATCCTATCATAAGTTGTCATCTGAAGATGAAGAGCGCGTGCGAAACACGGGCGCCGGAGAAGGAGAAAGGGGGAACGTGCCGTCTCCTCTGCCTGGTGGCATACCTCTGAATAATGATAGCCGAACCGCCGTTCATGGGCTTTGGACTTCAGTGATGAAGCCACCACAACCTGCGCCCTCGACGCCTCCTCAATATTTTTAA 699 0.5923 MEGDYSSFVTSPGGTVEVAKKPKGRPKGSKNKPKASRPLVPGDDVMMTPYVLEVPHGNDVVQAISRFSFRQNTGLCVLTASGTVVNASLCLSSAASTPDIACPGHHAILSMSAAFGPRQCPTSGYAAKPLTVSLAAPNGHVIGGLVFGGLVSVGPVYVIATSFNSPSYHKLSSEDEERVRNTGAGEGERGNVPSPLPGGIPLNNDSRTAVHGLWTSVMKPPQPAPSTPPQYF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0673 232 MobiDBLite consensus disorder prediction 169 202 - -
Prci15g0673 232 SUPERFAMILY AF0104/ALDC/Ptd012-like 47 177 - -
Prci15g0673 232 MobiDBLite consensus disorder prediction 1 42 - -
Prci15g0673 232 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 187 IPR014476 GO:0003680
Prci15g0673 232 MobiDBLite consensus disorder prediction 170 184 - -
Prci15g0673 232 ProSiteProfiles PPC domain profile profile. 44 186 IPR005175 -
Prci15g0673 232 Pfam Plants and Prokaryotes Conserved (PCC) domain 49 164 IPR005175 -
Prci15g0673 232 Gene3D - 48 181 - -
Prci15g0673 232 CDD DUF296 48 163 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0673 Prci-Chr15 4379387 4380085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0673 15 199 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 47.396 4.45e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0673 - - pcin:129294578 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0673 15 4379387 4380085 Prci15g0673 15 4379387 4380085 ECH