Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0653 ATGGCACCCAGTTTCGATTGTGTCTCGACTCTTCTCTGTGCAGAAGACGACAGCATTTTCGATGATACAGATAATGGAGCTACCATGGAGCCGTTGGAAGTTTCATGTGGATTCCATAGCCGAAACCTGTACTTTCATGATCGAGACGATAGGTTGCCATTGCAGGGTGACGAGTGTTTAGCGCGAATGGTGCAGAAGGAATGCGACCATTTGCCTGCTGGAGATTACTTGGATAGACTGCGAACAGCGGCTTTGGACTTCGGGGCCAGAAAGGAGGCCGTAGATTGGATTGAAAAGGTTCGAGAGCACTTCGGTTTCGGCCCGCTCTGTGCGTATCTATCCATAAACTACCTGGACCGTTTTCTCTCATCATACGAATTACCAAAGGGAAAAGGCTGGACAATGCAATTGCTGGCCGTGGCATGCCTGTCTCTCGCTGCCAAGATGGAAGAGACCGAAGTTCCCCCGTCTCTCGATCTGCAGGTTGGCGGATCGAAGTATGTGTTTGAAGCCAGAACAATACAAAGAATGGAACTTTTGGTGCTGAGCACGCTGAGGTGGAGAATGTGGGCCATCACTCCATATTCCTTCATAGACTATTTTCTATGGAAGGTGAACGACGATCAGGGCCCGGAAAGAAGTTCCATCACGCGATCCATCCAAATAATATCGAGCACAGTGAGAGGGGTTGACTTGTTGGAATTCAGGCCTTCGGAAATTGCAGCGGCGGTGGCAATATTTGTCGCGGGGGAAACCCGAAGGGTGAACAGGGAGAAAGCAATTTGCGCGGTGAGTCAACAAGTGAAAAAGGAGAGGGTGGTGGAATGCTTGAAGAAGATAAATGAGATGGCACCAAACAGCGTGCCGCAGAGCCCGATAGGGGTGTGGGAGGCGGCGTGCTTGAGCTATAGTAAAACCGAAGGATCGACGTGGTCACGTGAGGGGGGCGATGGTAAAAGGAGGAAGATAGATAATGACTGTGGGGAAGAGCTTTTGTAG 999 0.5035 MAPSFDCVSTLLCAEDDSIFDDTDNGATMEPLEVSCGFHSRNLYFHDRDDRLPLQGDECLARMVQKECDHLPAGDYLDRLRTAALDFGARKEAVDWIEKVREHFGFGPLCAYLSINYLDRFLSSYELPKGKGWTMQLLAVACLSLAAKMEETEVPPSLDLQVGGSKYVFEARTIQRMELLVLSTLRWRMWAITPYSFIDYFLWKVNDDQGPERSSITRSIQIISSTVRGVDLLEFRPSEIAAAVAIFVAGETRRVNREKAICAVSQQVKKERVVECLKKINEMAPNSVPQSPIGVWEAACLSYSKTEGSTWSREGGDGKRRKIDNDCGEELL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0653 332 SUPERFAMILY Cyclin-like 174 283 IPR036915 -
Prci15g0653 332 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Prci15g0653 332 Gene3D - 60 279 - -
Prci15g0653 332 PANTHER CYCLINS 61 282 IPR039361 -
Prci15g0653 332 SUPERFAMILY Cyclin-like 55 189 IPR036915 -
Prci15g0653 332 FunFam D2/4-type cyclin 73 186 - -
Prci15g0653 332 FunFam D6-type cyclin 187 278 - -
Prci15g0653 332 SMART cyclin_7 200 282 IPR013763 -
Prci15g0653 332 SMART cyclin_7 95 183 IPR013763 -
Prci15g0653 332 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
Prci15g0653 332 SMART Cyclin_C_2 192 314 IPR004367 -
Prci15g0653 332 Pfam Cyclin, C-terminal domain 192 291 IPR004367 -
Prci15g0653 332 Gene3D - 73 190 - -
Prci15g0653 332 Pfam Cyclin, N-terminal domain 60 189 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0653 Prci-Chr15 4262624 4265387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0653 10 256 Core Cell Cycle Gene Families AT5G65420 51.587 1.14e-81 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0653 K18810 - qsa:O6P43_019581 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0653 15 4262624 4265387 Prci15g0653 15 4262624 4265387 ECH