Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0652 ATGGGAGAAGATTGTGGAACCTGGGTGCCACAGCGGCGTTTGGATTGGCAAACACCCAATCTAAGCTCCTTTAGGGCTCCGTGTGAGGGAAAGCAGACCGGTGTTTCTGCACCTGGCATTGATAATATGATCACGTCTAATGAGGCAATGCCAGCTTATGCATCCTCTGTGTTGCCTCATTTACAATTAGGACATTCTAATGAACCTTCTCTTGGTTGGTTTTACTGTTTGCCTCAGTTTGGACAGTCCTTCATGCCTGCGGCCAACCTCTCTGTTAAGGGAAATCTCCTTGCTGGCCAAGTCAAAGGGTTTGGAGGGGAAACTGTCCCCAATCGGGAAACCCAAAAACAATTCCTTGTTATTGATCAGACGGGTTATCAGACGACTTTCATTTATAGTCCTCGGCTAGGCTCTTGGCCTTCCAAATGGTATGGTCCTAAGAATTTGAATGTGAACGAGCCTTCTTTTAAAACAGATGCAAACGATCTTATTGGATCAAGTTTCCCAGCCGAAGTTGATGAAAATCAGGAAAGGGACATGGAAAGTGAGATGCATGAAGATACGGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGATTACTCTACTGAGGACGACGAAGAAGTTACTAGCACAGGGCATTCTCCAAGCACGTTGACCACTCATGATGATAGCCGAGAAATCTTTAGAGCAGCCACTGAAGAAGTTGGGACGTCCTCTGGAAAATCAAAGAAGAGGAAGCTGTCAGACTCTGCTTATGACGACACTGCCACTTCTCTGAATCTGAAGAGACCCAATGAGTATGAGAGTGGAGGTGATGCAGAATCGAGATGTTCTGGTGGAAAGAGCCAGGGGTCTGGTGAAATGGGTTCCTTGTCAGGCAATAAGAAGATGAGAAGGGAGAAGATACGAGAAGTTCTGAGCGTTCTGCAGAGCATAATTCCTGGCGGGAAGGACAAGGACCCAATTGTGCTTCTCGATGAAGCCATATGTTGCTTGAAGTCCTTGAAACTCAAGGCTAGAACTCTCGGACTTGATGCCTTGTTGAGTTCTTAG 1059 0.4608 MGEDCGTWVPQRRLDWQTPNLSSFRAPCEGKQTGVSAPGIDNMITSNEAMPAYASSVLPHLQLGHSNEPSLGWFYCLPQFGQSFMPAANLSVKGNLLAGQVKGFGGETVPNRETQKQFLVIDQTGYQTTFIYSPRLGSWPSKWYGPKNLNVNEPSFKTDANDLIGSSFPAEVDENQERDMESEMHEDTEEINALLYSDSDDYSTEDDEEVTSTGHSPSTLTTHDDSREIFRAATEEVGTSSGKSKKRKLSDSAYDDTATSLNLKRPNEYESGGDAESRCSGGKSQGSGEMGSLSGNKKMRREKIREVLSVLQSIIPGGKDKDPIVLLDEAICCLKSLKLKARTLGLDALLSS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0652 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 344 IPR036638 GO:0046983
Prci15g0652 352 PANTHER TRANSCRIPTION FACTOR BHLH145 8 347 IPR037546 -
Prci15g0652 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Prci15g0652 352 MobiDBLite consensus disorder prediction 172 188 - -
Prci15g0652 352 MobiDBLite consensus disorder prediction 278 292 - -
Prci15g0652 352 MobiDBLite consensus disorder prediction 160 188 - -
Prci15g0652 352 MobiDBLite consensus disorder prediction 200 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0652 Prci-Chr15 4248765 4252480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0652 72 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.967 5.32e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0652 - - aprc:113846036 384.03