Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0644 ATGGAATTTGAGGAGCAGGATCAGGAGCACGAAGAGGCGGAGGAAGAAATGGGGATTCCCGTGCCCCCGCCGAGTTACGACTCAGTTCGGTCAAAAAGGGGCGCTGCCTTCGGAGCCGAGGGAGGCTCATCCGGCCTGACCAGGGCTAGGAAAGGCGGTCCTACTGGAACGGTCAGGTACAGGGAGTGTCAAAAGAATCACGCCGTCAGCATCGGTGGCCACGCCGTTGACGGTTGTGGTGAGTTTCTGGCTGCGGGAGAGGAAGGCACACTCGACGCTCTCAAATGCGCCGCCTGCAACTGTCACCGCAACTTCCACCGCAAGGAGATCGAGGGGGAAACTAGCTCCTTTCACCTGCAACAGCCGCACAACCCCCAGTACCACCATCAATTTCCCCCTTATTACCGGGGGCCGCCGCCGCCGCCAGGAACAGGATACCTGCATCACCATCTGACAAATCCGGCGATGGTACATCACCGCCCTTTGGCTCTACCAGCAGCGGCATCCGGCGGGGGACCGAATAGAGAAGAGGAAGACATGTCGAATCCGAGCAGCAGCGGTGGAGGCGGGGGTTTCGGTGGTGGAGGGAGCGGCAGCGAAAGGAAGAAAAGGTTTAGAACGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGCATTTTCGGAAAAGGTGGGGTGGAGAATCCAGAAGCATGACGAGCCGGCGGTGGAGCAATTCTGTGCGGAGACTGGCGTCAAGAGACAGGTACTTAAGGTTTGGATGCATAACAATAAAAACACTCTCGTGTACAACACCCTTGATGAGCTTGAGCTAGGTGCAAGCATCATAGGAGGCATCTGGTTCAGAATAACAGGAAGCGAGGTTAATTGCGACATTTCAGGGAAGAGAGACAAAAAAGAGCGAGTAGGAAGTAATGGAAGAAAGAATGAAGATGGTGGTGATCTCATGTGA 951 0.5542 MEFEEQDQEHEEAEEEMGIPVPPPSYDSVRSKRGAAFGAEGGSSGLTRARKGGPTGTVRYRECQKNHAVSIGGHAVDGCGEFLAAGEEGTLDALKCAACNCHRNFHRKEIEGETSSFHLQQPHNPQYHHQFPPYYRGPPPPPGTGYLHHHLTNPAMVHHRPLALPAAASGGGPNREEEDMSNPSSSGGGGGFGGGGSGSERKKRFRTKFTQEQKEKMLAFSEKVGWRIQKHDEPAVEQFCAETGVKRQVLKVWMHNNKNTLVYNTLDELELGASIIGGIWFRITGSEVNCDISGKRDKKERVGSNGRKNEDGGDLM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0644 316 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 109 IPR006456 -
Prci15g0644 316 NCBIfam homeobox domain, ZF-HD class 202 259 IPR006455 -
Prci15g0644 316 SUPERFAMILY Homeodomain-like 189 260 IPR009057 -
Prci15g0644 316 FunFam Zinc-finger homeodomain protein 2 195 262 - -
Prci15g0644 316 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
Prci15g0644 316 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 261 - -
Prci15g0644 316 MobiDBLite consensus disorder prediction 1 55 - -
Prci15g0644 316 Gene3D - 192 262 - -
Prci15g0644 316 MobiDBLite consensus disorder prediction 164 203 - -
Prci15g0644 316 MobiDBLite consensus disorder prediction 294 316 - -
Prci15g0644 316 Pfam ZF-HD protein dimerisation region 58 110 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0644 Prci-Chr15 4220134 4222466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0644 1 261 ZF-HD Transcription Factor Family AT4G24660 51.908 1.33e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci15g0644 ZF-HD_dimer 4.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0644 - - pcin:129294191 467.618