Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0636 ATGACAATCCACTGGGACACTCGCCCTCCTCCCGTTCTCCTCCTCCCACTCTCCGCTTTCGATCGCCACCATGGTCTCCGCTGCCTTGCCCTGCTTTTGCTTGCCTTCCCGGCCACCGCGCAGTTCCCCGCCTCGCCTCCGCCCCCGCCCGCCGACCCTTTTGCCAGGCTTAAGTTCGACAAGAACATGGCCATCATCATGGTCATCCTGGTCCTCGTGTTCTTCTTATTGGGCTTTCTTTCCATCTACACTCGCCAATGCGCAGAGCGCCGGATGAGGGGAAGACTCGATCTTGCACTCCCGATCAGCATCAGCAGCCGGCGACCGCGAGGTCTTGACCCTGAGATCATCGACAGTTTTCCCACTTTCGTCTACTCCTCCGTCAAAGGGCTTAAGATGGGGAGAACCTCACTGGAATGTGCCGTCTGTCTGAACGAGTTCGAAGACGACGAAACTCTGCGTTTGATCCCCAAATGCAGCCACGTGTTTCATCCCGATTGTATCGATCTCTGGTTGTCTTCCCACTCCACCTGCCCCCTCTGCCGGGCCAACCTCGTTCCAAAACCCGGTGATGCGTCCTTCGTCGCCATTCAGATCCCCAATCCGGCCGTCGACAACACCCAGTCCAATTCGAGCTCCGCACCCCGTGAGGGACCCCAGGACAACATAAACACGGTGGCACCGGAGTCTCCGATTCTGAGCCGATATCACACCGTGAGCCGGGGTTGGACACCTAGGTCAAAGTCAACGGGCTTTCGTGTGGCCGGGTTATTGCCGCGTTCTCATTCCACGGGTCATTCCTTGCAGCTTCAACCCGGGGAGAACTGGGAGAGGTTTACTCTGAGATTACCAGAGGATGCCCGTAAACAGTTATTAAACCGCACAAATAGCTGCGTAGCGTTTACAAGAGAGAGCAGTCAGAGGAGGGGTTATAGGACAAGAAGCGTGGGGAGCGGATGGGCCAAGAACTATTTGCAGTACGAGCGATTCGGTGGCGAGGGGCGGTCGGAGCATTGGGCGTTCACTTCGAGGCCGCCGTTTCTGAGCAGGACTAGTTCGACGGCGGCCGACAAGGCACCGGTGGGTCCATCGGGGGTGGGTTTGGACGACATCGGGGAACTATCTTCTGATCCACTGTTCCCGGGGAACAAAGATTAG 1158 0.5751 MTIHWDTRPPPVLLLPLSAFDRHHGLRCLALLLLAFPATAQFPASPPPPPADPFARLKFDKNMAIIMVILVLVFFLLGFLSIYTRQCAERRMRGRLDLALPISISSRRPRGLDPEIIDSFPTFVYSSVKGLKMGRTSLECAVCLNEFEDDETLRLIPKCSHVFHPDCIDLWLSSHSTCPLCRANLVPKPGDASFVAIQIPNPAVDNTQSNSSSAPREGPQDNINTVAPESPILSRYHTVSRGWTPRSKSTGFRVAGLLPRSHSTGHSLQLQPGENWERFTLRLPEDARKQLLNRTNSCVAFTRESSQRRGYRTRSVGSGWAKNYLQYERFGGEGRSEHWAFTSRPPFLSRTSSTAADKAPVGPSGVGLDDIGELSSDPLFPGNKD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0636 385 MobiDBLite consensus disorder prediction 349 385 - -
Prci15g0636 385 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Prci15g0636 385 SMART ring_2 140 181 IPR001841 -
Prci15g0636 385 PANTHER RING FINGER DOMAIN-CONTAINING 47 192 - -
Prci15g0636 385 MobiDBLite consensus disorder prediction 203 227 - -
Prci15g0636 385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 187 IPR013083 -
Prci15g0636 385 FunFam E3 ubiquitin-protein ligase ATL6 102 188 - -
Prci15g0636 385 CDD RING-H2_EL5-like 139 182 - -
Prci15g0636 385 SUPERFAMILY RING/U-box 134 190 - -
Prci15g0636 385 Pfam Ring finger domain 139 182 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0636 Prci-Chr15 4151208 4152975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0636 25 371 Rapid Response to Elicitors AT3G05200 36.927 2.57e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0636 K10664 - qsa:O6P43_019600 367.466