Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0634 ATGGCACTAGAGGCTGTAGTTTTCTCGCAGGATCCCTTCCCGTATAGTTGGTGCAAGGACCCATACTCGTTCGCAGCAGCATGGAAACCCGACGACCATGGTTTCCATGCAGGAGAAGAGAAGGCCCCCTTCGGAGTGCTTATCAACAGTGACATAGTGCCCACACAACTCCATGCAACTTGGGACTCTAACTCTTCCCCGGATGCCTGCACCGTCCACCAATCACTGATCTCCCCTGCTCCCTCAGGTCGGCGTAAACGACGTCGCTCCAAGATTGCCAAGAACAAGGAGGACCTCGAGAGCCAGAGGATGACTCACATTGCTGTGGAGCGCAATCGACGGAGACAGATGAATGACTACCTCGCGGCGCTTCGTTCCTTGATGCCTCCGTCTTACGTTCAAAGGGGGGACCAGGCGTCTATAATAGGAGGCGCCATTAACTTCGTGAAAGAGCTAGAGCAGCTGTTGCAGTCAATGGAGGGACGAAAGAAGAAGACGATGCAACAAGAGAAGGATTGCGGGACGAGCAGCTCGCCCTTTGCCGAGTTCTTCACGTTCCCACAGTACTCCACTCACTCAAATCAGAGCAATCCCTCCTCCGGGCAATGGGCCGTAGCGGACATTGAAGTCACCATGGTCGACACTCATGCCAACCTCAAGATACTCTCCAAGAAACGTTCCGGCCAGCTCACCAAGATCGTCGTCGGCCTTCAAGCTCTCAGGCTCACCGTTCTCCACCTCAACGTGACTACTCACGACGACATGGTCCTTTACTCTGCTAGTGTCAAGCTTGAAGATGGGTGCGAGCTGAATACGGTGGATGAAATCGCTGCTGCTGTGAATCAGCTATTGCGCAGAATCCAAGAGGAAGGGCCTTTCTGCTGA 885 0.539 MALEAVVFSQDPFPYSWCKDPYSFAAAWKPDDHGFHAGEEKAPFGVLINSDIVPTQLHATWDSNSSPDACTVHQSLISPAPSGRRKRRRSKIAKNKEDLESQRMTHIAVERNRRRQMNDYLAALRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGRKKKTMQQEKDCGTSSSPFAEFFTFPQYSTHSNQSNPSSGQWAVADIEVTMVDTHANLKILSKKRSGQLTKIVVGLQALRLTVLHLNVTTHDDMVLYSASVKLEDGCELNTVDEIAAAVNQLLRRIQEEGPFC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0634 294 Gene3D - 91 178 IPR036638 GO:0046983
Prci15g0634 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 152 IPR011598 GO:0046983
Prci15g0634 294 Coils Coil 149 169 - -
Prci15g0634 294 Pfam Helix-loop-helix DNA-binding domain 102 153 IPR011598 GO:0046983
Prci15g0634 294 MobiDBLite consensus disorder prediction 74 101 - -
Prci15g0634 294 SMART finulus 107 158 IPR011598 GO:0046983
Prci15g0634 294 PANTHER MAX DIMERIZATION, MAD 75 290 - -
Prci15g0634 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 169 IPR036638 GO:0046983
Prci15g0634 294 CDD bHLH_AtFAMA_like 104 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0634 Prci-Chr15 4116152 4117824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0634 1 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.173 3.35e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci15g0634 HLH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0634 - - gmx:100789380 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0595 2 4341082 4342570 Prci15g0634 15 4116152 4117824 CCT
Prci15g0634 15 4116152 4117824 Prci15g0634 15 4116152 4117824 ECH