Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0612 ATGGAACCTTCTACAGCGCAGATGGCGGGAGGACCCCGAGATCGCAGAGCTGATGCTCTTGGGGACCTTCGAGTCCTACCCGATGAAATCATCTGTTCAATTTTAGAGGAACTCACTCCTCGAGATGTTGCTCGCCTCGCTTGCGTTAGCAGCGTAATGTACTTACTGTGCAATGAAGAACCACTATGGATGATTTTATGCCTTAAGGGAGCTTCTGGTTTACTTCAGTACAAAAGCTCTTGGAAGAAAACTGCGCTGCATCACGAGAATTTGCCAGACAAATATATTGAGTGTAATAGAGGATTTCTTCATTTTGATGGATTTAACTCGTTATATTTGTATAGAAGATTATACAGGTGTCACACCAAGTTGGATACATTTTATGTGGATAATGGAAATGTAAGAAGAAAAGATGTCTCTCTAGAAGACTTCCGTGATGAATATGATGGGAAGAAACCGGTAATGCTTACTGGATTGGCTGATGCATGGCCTGCAAGGCATAAATGGACAACTGATCAGCTGTTGCTAAGCTATGGAGATGTAGCATTTAAGATTTCTCAAAGGAGTTCTCGGAAGATCTTGATGAAGTTTAAGGATTATGTTTCCTACATCAAACTTCAGCATGATGAAGATCCATTGTACATTTTTGATGAAAAGTTTGGTGAAACTGCACCGGGCTTGCTGAAGGATTACTGTGTGCCTCATTTGTTTCAAGAAGACTTCTTTGATATTTTAGATGAAGATAAACGGCCACCCTACAGGTGGCTCATAATTGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTCACTAGCGCATGGAACACTCTTCTTTCTGGTCGCAAAAGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTGGGAGTCACAGTGCATGTCAATGAAGAGGATGGTGATGTTAACATCGAGACACCATCATCACTGCAGTGGTGGCTGGACTTCTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAGACAATTTATGTTCCCAGTGGATGGTGGCACTGTGTTCTAAACTTGGAAACAACTATCGCTGTCACGCAGAATTTTGTGAATTCCAGTAACTTTGAATTTGTATGTTTGGATATGGCCCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTAGCTCTTGATGATGATAGTTACGAACATGTGAAAAAGAATGTTTTCTGTGATGAACAGAATTTGAGTTATTCCATTCCGCCAAAGAGAGAAAAAAGAGCCAGAAATCATGAAAATGGAGATGATTTGAATAATGAAAGAACAAAAAATGGTGTATCTAGGGCCTATAATGCATGGAAAGATGGATTTTCTTATGATATTAAGTTCTTATCCATGTTTTTGGATAAAGACAGGGACCACTACAGGTCCCCATGGAGTTCAGGCAACAGCATTGGCCAGCGAGAATTAAGAGAATGGTTATCCAAACTCTGGATTGGAAAACCAGAAATGAGAGCGCTAATATGGAAGGGAGCATGTATTTCACTAAATGCTGGCAAGTGGTCAGAATGCCTATCTGAAATTTGTTCCTTCCACAATATTCCCTCTCCCCTTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTCGTGGGAAACACAGTTGTCAAAATCTTTGTTGAAGGAGGGCTAGAAGTTGCACTTTATGGTTTAGGCACAGAGCTCGAGTTTTACAATATATTGCATGAAGTTAACTCCCCTCTTAGGAATTGTATTCCCGAGGGCTTGGGCACTGGAATTCTTTATCTTGATAACGGAACTTACACCAATCTGCCTTGGGACGGAAAGGGAGTTCCAGATATTGTTATCAAGAATAATCTAACCGGGCAAAAAGGTGGAGTTGATGATTTCCTATTTGGTGTGTGGGGCAAGAAGCAGTTTGAATATAGGAATGCTGAGATGCCAAAACATGAATCAGTTAGTTCAGCTGGGCACTCAAATATATGGCCTTATATTATAACAAAACGTTGCGAGGGTAAAATATTTGCTGAGTTAAGAGATATACTATCAAAGGAAGACGTAACAAACTTAGCTTCCTTCTTGGGAGAGCAGTTGCGGCATATTCACCTTTTACCACATCCACCATTGAATGTTTCAGCTTTCTCTGTCATTGAACAGGATTCAGGCTTGCCTGAGATTAATGGTTATGCTGCAAGTTTTAATAATAAATTAAACATGAGAGCAGAGTGGGAAATCTTTATCAGAACTTTAACGAGAAAGAGGAAGGATGTCTTGAGTCGCTTGGCTAAGTGGGGGGACCCGATCCCTAGGAAACTGATAGAGAAGGTCAATAAATATCTTCCTCATCAATTCGAAAATTTGTTGAACATAACCGAGTCCCAGGACAATGCTCGTAAACCATGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGGAACCATCATGTGTTTCTACCGCAAGTGAAACCTCTAGACAGGGTGCGCTGGCAGACAATAGATCTTTATGTGGTTCCAGTGTAAATAGAGATGTGAAGTCATGGCGCCCTAGCTACATCCTTGATTTCAGTGATCTTTCAATTGGTGATCCTATTTTGGATTTGATACCAATTTATTTAGATGTATTTAGAGGTGATTCTTATCTCCTCAAGCTATTTTTAGAAAGCTACAAGCTTCCTCTTGCAATTAATATCTCAAAGCATGAATCAGCAGAGAATGATGATAAATGTTGCCGGCTTTCATATCTTGCCATGTGCTACTGTATATTGCATGATGATAATGTCTTGGGAGCTATATTTAGTATATGGGATGAACTTAGATCAGCAAATTCATGGGAAGAGGTTGAATTGACGGTGTGGGGGGCGTTGAACAATTACAAAGGCTTTCCTTGA 2934 0.41 MEPSTAQMAGGPRDRRADALGDLRVLPDEIICSILEELTPRDVARLACVSSVMYLLCNEEPLWMILCLKGASGLLQYKSSWKKTALHHENLPDKYIECNRGFLHFDGFNSLYLYRRLYRCHTKLDTFYVDNGNVRRKDVSLEDFRDEYDGKKPVMLTGLADAWPARHKWTTDQLLLSYGDVAFKISQRSSRKILMKFKDYVSYIKLQHDEDPLYIFDEKFGETAPGLLKDYCVPHLFQEDFFDILDEDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSSNFEFVCLDMAPGYRHKGVCRAGLLALDDDSYEHVKKNVFCDEQNLSYSIPPKREKRARNHENGDDLNNERTKNGVSRAYNAWKDGFSYDIKFLSMFLDKDRDHYRSPWSSGNSIGQRELREWLSKLWIGKPEMRALIWKGACISLNAGKWSECLSEICSFHNIPSPLDDERLPVGTGSNPVFLVGNTVVKIFVEGGLEVALYGLGTELEFYNILHEVNSPLRNCIPEGLGTGILYLDNGTYTNLPWDGKGVPDIVIKNNLTGQKGGVDDFLFGVWGKKQFEYRNAEMPKHESVSSAGHSNIWPYIITKRCEGKIFAELRDILSKEDVTNLASFLGEQLRHIHLLPHPPLNVSAFSVIEQDSGLPEINGYAASFNNKLNMRAEWEIFIRTLTRKRKDVLSRLAKWGDPIPRKLIEKVNKYLPHQFENLLNITESQDNARKPCSWIHSDIMDDNIYMEPSCVSTASETSRQGALADNRSLCGSSVNRDVKSWRPSYILDFSDLSIGDPILDLIPIYLDVFRGDSYLLKLFLESYKLPLAINISKHESAENDDKCCRLSYLAMCYCILHDDNVLGAIFSIWDELRSANSWEEVELTVWGALNNYKGFP 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0612 977 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Prci15g0612 977 SUPERFAMILY Clavaminate synthase-like 138 377 - -
Prci15g0612 977 FunFam F-box protein At1g78280 114 370 - -
Prci15g0612 977 SMART cupin_9 217 380 IPR003347 -
Prci15g0612 977 MobiDBLite consensus disorder prediction 423 442 - -
Prci15g0612 977 SUPERFAMILY F-box domain 17 73 IPR036047 GO:0005515
Prci15g0612 977 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 20 558 - -
Prci15g0612 977 SUPERFAMILY Protein kinase-like (PK-like) 674 904 IPR011009 -
Prci15g0612 977 SMART fbox_2 26 66 IPR001810 GO:0005515
Prci15g0612 977 ProSiteProfiles JmjC domain profile. 222 385 IPR003347 -
Prci15g0612 977 Pfam Cupin-like domain 149 371 IPR041667 -
Prci15g0612 977 Pfam F-box-like 25 68 IPR001810 GO:0005515
Prci15g0612 977 Gene3D Cupin 118 370 - -
Prci15g0612 977 Gene3D - 16 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0612 Prci-Chr15 4007458 4016281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0612 11 973 Glycosyltransferase AT1G78280 61.515 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci15g0612 Cupin_8 1.4e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0612 - - gmx:100792541 1537.32