Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0611 ATGGCGGGAGGACCCCGAGATCGCAGAGCTGATGCTCTTGGGGACCTTCGAGTCCTACCCGATGAAATCATCTGTTCAATTTTAGAGGAACTCACTCCTCGAGATGTTGCTCGCCTCGCTTGCGTTAGCAGCGTAATGTACTTACTGTGCAATGAAGAACCACTATGGATGATTTTATGCCTTAAGGGAGCTTCTGGTTTACTTCAGTACAAAAGCTCTTGGAAGAAAACTGCGCTGCATCACGAGAATTTGCCAGACAAATATATTGAGTGTAATAGAGGATTTCTTCATTTTGATGGATTTAACTCGTTATATTTGTATAGAAGATTATACAGGTGTCACACCAAGTTGGATACATTTTATGTGGATAATGGAAATGTAAGAAGAAAAGATGTCTCTCTAGAAGACTTCCGTGATGAATATGATGGGAAGAAACCGGTAATGCTTACTGGATTGGCTGATGCATGGCCTGCAAGGCATAAATGGACAACTGATCAGCTGTTGCTAAGCTATGGAGATGTAGCATTTAAGATTTCTCAAAGGAGTTCTCGGAAGATCTTGATGAAGTTTAAGGATTATGTTTCCTACATCAAACTTCAGCATGATGAAGATCCATTGTACATTTTTGATGAAAAGTTTGGTGAAACTGCACCGGGCTTGCTGAAGGATTACTGTGTGCCTCATTTGTTTCAAGAAGACTTCTTTGATATTTTAGATGAAGATAAACGGCCACCCTACAGGTGGCTCATAATTGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTCACTAGCGCATGGAACACTCTTCTTTCTGGTCGCAAAAGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTGGGAGTCACAGTGCATGTCAATGAAGAGGATGGTGATGTTAACATCGAGACACCATCATCACTGCAGTGGTGGCTGGACTTCTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAGACAATTTATGTTCCCAGTGGATGGTGGCACTGTGTTCTAAACTTGGAAACAACTATCGCTGTCACGCAGAATTTTGTGAATTCCAGTAACTTTGAATTTGTATGTTTGGATATGGCCCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTAGCTCTTGATGATGATAGTTACGAACATGTGAAAAAGAATGTTTTCTGTGATGAACAGAATTTGAGTTATTCCATTCCGCCAAAGAGAGAAAAAAGAGCCAGAAATCATGAAAATGGAGATGATTTGAATAATGAAAGAACAAAAAATGGTGTATCTAGGGCCTATAATGCATGGAAAGATGGATTTTCTTATGATATTAAGTTCTTATCCATGTTTTTGGATAAAGACAGGGACCACTACAGGTCCCCATGGAGTTCAGGCAACAGCATTGGCCAGCGAGAATTAAGAGAATGGTTATCCAAACTCTGGATTGGAAAACCAGAAATGAGAGCGCTAATATGGAAGGGAGCATGTATTTCACTAAATGCTGGCAAGTGGTCAGAATGCCTATCTGAAATTTGTTCCTTCCACAATATTCCCTCTCCCCTTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTCGTGGGAAACACAGTTGTCAAAATCTTTGTTGAAGGAGGGCTAGAAGTTGCACTTTATGGTTTAGGCACAGAGCTCGAGTTTTACAATATATTGCATGAAGTTAACTCCCCTCTTAGGAATTGTATTCCCGAGGGCTTGGGCACTGGAATTCTTTATCTTGATAACGGAACTTACACCAATCTGCCTTGGGACGGAAAGGGAGTTCCAGATATTGTTATCAAGAATAATCTAACCGGGCAAAAAGGTGGAGTTGATGATTTCCTATTTGGTGTGTGGGGCAAGAAGCAGTTTGAATATAGGAATGCTGAGATGCCAAAACATGAATCAGTTAGTTCAGCTGGGCACTCAAATATATGGCCTTATATTATAACAAAACGTTGCGAGGGTAAAATATTTGCTGAGTTAAGAGATATACTATCAAAGGAAGACGTAACAAACTTAGCTTCCTTCTTGGGAGAGCAGTTGCGGCATATTCACCTTTTACCACATCCACCATTGAATGTTTCAGCTTTCTCTGTCATTGAACAGGATTCAGGCTTGCCTGAGATTAATGGTTATGCTGCAAGTTTTAATAATAAATTAAACATGAGAGCAGAGTGGGAAATCTTTATCAGAACTTTAACGAGAAAGAGGAAGGATGTCTTGAGTCGCTTGGCTAAGTGGGGGGACCCGATCCCTAGGAAACTGATAGAGAAGGTCAATAAATATCTTCCTCATCAATTCGAAAATTTGTTGAACATAACCGAGTCCCAGGACAATGCTCGTAAACCATGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGGAACCATCATGTGTTTCTACCGCAAGTGAAACCTCTAGACAGGGTGCGCTGGCAGACAATAGATCTTTATGTGGTTCCAGTGTAAATAGAGATGTGAAGTCATGGCGCCCTAGCTACATCCTTGATTTCAGTGATCTTTCAATTGGTGATCCTATTTTGGATTTGATACCAATTTATTTAGATGTATTTAGAGGTGATTCTTATCTCCTCAAGCTATTTTTAGAAAGCTACAAGCTTCCTCTTGCAATTAATATCTCAAAGCATGAATCAGCAGAGAATGATGATAAATGTTGCCGGCTTTCATATCTTGCCATGTGCTACTGTATATTGCATGATGATAATGTCTTGGGAGCTATATTTAGTATATGGGATGAACTTAGATCAGCAAATTCATGGGAAGAGGTTGAATTGACGGTGTGGGGGGCGTTGAACAATTACAAAGGCTTTCCTTGA 2913 0.4092 MAGGPRDRRADALGDLRVLPDEIICSILEELTPRDVARLACVSSVMYLLCNEEPLWMILCLKGASGLLQYKSSWKKTALHHENLPDKYIECNRGFLHFDGFNSLYLYRRLYRCHTKLDTFYVDNGNVRRKDVSLEDFRDEYDGKKPVMLTGLADAWPARHKWTTDQLLLSYGDVAFKISQRSSRKILMKFKDYVSYIKLQHDEDPLYIFDEKFGETAPGLLKDYCVPHLFQEDFFDILDEDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSSNFEFVCLDMAPGYRHKGVCRAGLLALDDDSYEHVKKNVFCDEQNLSYSIPPKREKRARNHENGDDLNNERTKNGVSRAYNAWKDGFSYDIKFLSMFLDKDRDHYRSPWSSGNSIGQRELREWLSKLWIGKPEMRALIWKGACISLNAGKWSECLSEICSFHNIPSPLDDERLPVGTGSNPVFLVGNTVVKIFVEGGLEVALYGLGTELEFYNILHEVNSPLRNCIPEGLGTGILYLDNGTYTNLPWDGKGVPDIVIKNNLTGQKGGVDDFLFGVWGKKQFEYRNAEMPKHESVSSAGHSNIWPYIITKRCEGKIFAELRDILSKEDVTNLASFLGEQLRHIHLLPHPPLNVSAFSVIEQDSGLPEINGYAASFNNKLNMRAEWEIFIRTLTRKRKDVLSRLAKWGDPIPRKLIEKVNKYLPHQFENLLNITESQDNARKPCSWIHSDIMDDNIYMEPSCVSTASETSRQGALADNRSLCGSSVNRDVKSWRPSYILDFSDLSIGDPILDLIPIYLDVFRGDSYLLKLFLESYKLPLAINISKHESAENDDKCCRLSYLAMCYCILHDDNVLGAIFSIWDELRSANSWEEVELTVWGALNNYKGFP 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0611 970 SUPERFAMILY Protein kinase-like (PK-like) 667 897 IPR011009 -
Prci15g0611 970 ProSiteProfiles JmjC domain profile. 215 378 IPR003347 -
Prci15g0611 970 MobiDBLite consensus disorder prediction 416 435 - -
Prci15g0611 970 Pfam F-box-like 18 61 IPR001810 GO:0005515
Prci15g0611 970 Gene3D Cupin 111 363 - -
Prci15g0611 970 Gene3D - 10 88 - -
Prci15g0611 970 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Prci15g0611 970 Pfam Cupin-like domain 142 364 IPR041667 -
Prci15g0611 970 SMART fbox_2 19 59 IPR001810 GO:0005515
Prci15g0611 970 SUPERFAMILY F-box domain 10 66 IPR036047 GO:0005515
Prci15g0611 970 SMART cupin_9 210 373 IPR003347 -
Prci15g0611 970 SUPERFAMILY Clavaminate synthase-like 131 370 - -
Prci15g0611 970 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 13 551 - -
Prci15g0611 970 FunFam F-box protein At1g78280 107 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0611 Prci-Chr15 4007433 4016281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0611 4 966 Glycosyltransferase AT1G78280 61.515 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci15g0611 Cupin_8 1.4e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0611 - - gmx:100792541 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0611 15 4007433 4016281 Prci15g0611 15 4007433 4016281 ECH