Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0580 ATGACGAACCAGAATCTGGTGGTTCCTGACGTAAAATCACGTATTAACACCTTTATTGAGGTGGCCGTGTCCATTTCCAACTCGCCCATGCTGCCCAGCACGGGAGTACCAGAATCGCTGGTCGTGTTTGGTGGGATTGTCGGTAAGAAGATAATGAAGAGGCTTGACGATGGAGGAGGCAAAGGTGGAGCCAGAGTTAATGCCTGGATTGATTCGATGAGAGCTTCCTCTCCCACACGAGTCAAATCCACCCTTCCTACTTCTCAAAACCAACGCTTGAGTTCTTGGGCTCTTCATCATCCTTCGGCGATCAGCATGTTTGATCAGATAATCAATAAGTCAAAAGATAAGCCGATAGCAATCTTCCTTGACTACGATGGAACTCTCTCCCCAATAGTTGCTGACCCAGATAAAGCGTTCATGACAAAGAAGATGAGAGCAACAGTAAAGGATATAGCAAAACAATTCCCCACAGCCATCGTGAGTGGAAGGCGAAGAGACAAGGTTTACAAGTTTGTGAGATTAGCAGAGCTGTACTACGCAGGCAGCCATGGCATGGACATCAAAGGACCGACAAAAAGCCAGGGATTTAAGAAGGGTAATCAAGCAGCCCCCTTCCAACCTGCGAGCCAATTCTTGCCCATGATCAATGAGGTTTACAAGATCTTGTTGGAGAAAACAAAATCTGTGGAAGGGGTAAAGGTTGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGCGTTGACGAAAAGAGCTGGGGTGCATTGGCGGAGCAAGTTCGAGTGGTGCTGAATCAGTACCCAAAACTTAGGCTGACAGAAGGGAGAAAAGTGCTTGAGATCCGACCAATCATCAAATGGGACAAGGGCAAAGCACTTGAATTTTTGTTACAATCGCTCGGATTCACCAATTCCGAGGATGTCTTTCCCATCTATATCGGCGATGACCGAACTGACGAGGATGCTTTTAAGGTGTTACGTAGTAGAGGCAGGGGCACGGGAATTCTTGTGTCTGAAGTGCCGAAAGAAACAGAAGCTTCCTACACTTTACAAGACCCATCAGAGGTTGAGCAATTTTTGCGGCGTTTGGTGGACTGGAAAAGGCGGAGTGATGAGAGGGGGAACGAGAGTTGA 1137 0.4723 MTNQNLVVPDVKSRINTFIEVAVSISNSPMLPSTGVPESLVVFGGIVGKKIMKRLDDGGGKGGARVNAWIDSMRASSPTRVKSTLPTSQNQRLSSWALHHPSAISMFDQIINKSKDKPIAIFLDYDGTLSPIVADPDKAFMTKKMRATVKDIAKQFPTAIVSGRRRDKVYKFVRLAELYYAGSHGMDIKGPTKSQGFKKGNQAAPFQPASQFLPMINEVYKILLEKTKSVEGVKVENNKFCLSVHFRCVDEKSWGALAEQVRVVLNQYPKLRLTEGRKVLEIRPIIKWDKGKALEFLLQSLGFTNSEDVFPIYIGDDRTDEDAFKVLRSRGRGTGILVSEVPKETEASYTLQDPSEVEQFLRRLVDWKRRSDERGNES 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0580 378 Gene3D - 209 377 IPR023214 -
Prci15g0580 378 Gene3D - 119 205 IPR023214 -
Prci15g0580 378 NCBIfam HAD-IIB family hydrolase 120 330 IPR006379 -
Prci15g0580 378 FunFam Trehalose 6-phosphate phosphatase 209 285 - -
Prci15g0580 378 Pfam Trehalose-phosphatase 122 355 IPR003337 GO:0003824|GO:0005992
Prci15g0580 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 59 374 IPR044651 GO:0004805|GO:0005992
Prci15g0580 378 NCBIfam trehalose-phosphatase 119 365 IPR003337 GO:0003824|GO:0005992
Prci15g0580 378 SUPERFAMILY HAD-like 120 368 IPR036412 -
Prci15g0580 378 CDD HAD_TPP 120 357 - -
Prci15g0580 378 FunFam Trehalose 6-phosphate phosphatase 215 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0580 Prci-Chr15 3766580 3768971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0580 120 366 Trehalose Biosynthesis Gene Families AT1G70290 28.517 2.53e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0580 K01087 - gmx:100788641 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0535 2 3907456 3909775 Prci15g0580 15 3766580 3768971 CCT
Prci15g0580 15 3766580 3768971 Prci15g0580 15 3766580 3768971 ECH