Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0560 ATGTCTCCAATGGGGGATCCAGCTGATGAAACCCATAAAACAAAAGAGATGGATGCTAGCAGTTTGTCATCTTCACAGGGTCAGGTACCACGCCTTCACAAAGTGGGAATTCCTCCGAGACAGAACCTCTTCAAGGAATTCCAATCCCTTGTCAAAGAAACATTCTTTGCTGATGATCCTCTACGCTCTTTCAAAGACCAGACTAAATTCCGGAAATTCATCCTTGGCATTGAGGCCGTATTCCCAATACTTAACTGGGGGAGAAATTACAATGCTGTCAAATTCAGAGGGGATATCATAGCTGGTCTGACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTTGCAAATTTGGCTCCACAGTACGGGCTGTATTCCAGCTTTGTGCCCCCGCTGATTTATGCTATCATGGGTAGTTCTCGTGATATTGCCATAGGACCTGTGGCGGTGGTTTCTCTCTTGTTAGGAACCTTACTTCAGAACGAGATTGATCCTATTTCACATCCATCTGAGTATCGAAGACTTGCTTTCACGGCTACTTTTTTTGCTGGCATTACTCAAGCAACTCTTGGGGTCTTCAGGCTGGGTTTTTTGATTGACTTCCTGTCCCATGCTGCTATCGTCGGTTTTATGGCGGGAGCTGCTATCACCATTGCCCTTCAACAGCTCAAGGGTTTCCTTGGCATTCAAAAGTTCACAAAGAAAACTGATATTGTGTCTGTGTTGCATTCAGTGTTCTCAAAAGCCCATGATGGTTGGAACTGGCAGACTATAGTCATAGGAGCAAGCTTTTTGGTTTTTCTGCTGATTGCAAGATATATGGGCAAAAAGAACAAGAAATTCTTCTGGGTGCCAGCAATTGCCCCATTGATATCGGTTATTCTCTCCACTTTAATTGTGTTCATAACCCGTGCGGACAAGCAAGGTGTTGAAATTGTAAAGCACATAAAGAAGGGGACCAATCCTTCATCTGTTAAAGAAATATATTTCAGTGGTGATTTCCTTGGGAAAGGTTTCAAGATTGGCATTGTGGCCGGCATGATAGCATTGACAGAAGCCACGGCAATAGGAAGAACCTTTGCTTCTATGAAGGATTATCATTTAGATGGAAATAAGGAAATGACAGCATTAGGAGCTATGAATATTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTTTCTCGGTCAGCAGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCTAATATTGTTATGTCCATCGTTGTGTTCTTGACCCTTCAGTTCATTACACCTCTCTTCAAGTATACTCCAAATGCCATTCTTTCTTCCATTATCATATCTGCTGTAATTGGACTTGTGGACTATCAGGCAGCAGTTTTAATATGGAAGATTGATAAATTTGATTTTATTGCTTGCATGGGAGCCTTTTTTGGGGTTGTTTTTGTCTCAGTTGAGATTGGACTTTTAATTGCTGTCTGTATATCCTTTGCTAAAATCCTATTACAAGTTACCAGACCACGAACAGCTATTCTGGGGAAGATCCCTGGGACAAATGTCTATAGAAATACCCAACAATACCCAGAGGCCACAAAGGTTCCTGGTGTGCTGATTGTAAGAATTGATTCTGCCATATGCTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTGAGATGGCTGACAGATGAGGAAGACAGAGTGAAAGGAGATTACCAAACACGAATCAAATTTTTGATAGTCGAAATGTCACCGGTTACTGACATTGATACCAGTGGCATTCATGCCTTTGAAGAGTTATACAAAAGTCTTCAAAAGAGAGATGTTCAGCTTGTCCTAGCAAACCCCGGCCCAGTAGTGATAAACAAGCTTCACACCTCAAATTTTGCAAATCTGATCGGTGAGGACAAGATCTACCTCACAGTTGCTGATGCTGTTGCGTACTGTTCCTCAAAGCTGGCGGAAGAGCCTTGA 1977 0.4213 MSPMGDPADETHKTKEMDASSLSSSQGQVPRLHKVGIPPRQNLFKEFQSLVKETFFADDPLRSFKDQTKFRKFILGIEAVFPILNWGRNYNAVKFRGDIIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAIMGSSRDIAIGPVAVVSLLLGTLLQNEIDPISHPSEYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIQKFTKKTDIVSVLHSVFSKAHDGWNWQTIVIGASFLVFLLIARYMGKKNKKFFWVPAIAPLISVILSTLIVFITRADKQGVEIVKHIKKGTNPSSVKEIYFSGDFLGKGFKIGIVAGMIALTEATAIGRTFASMKDYHLDGNKEMTALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILSSIIISAVIGLVDYQAAVLIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVCISFAKILLQVTRPRTAILGKIPGTNVYRNTQQYPEATKVPGVLIVRIDSAICFSNSNYVKERILRWLTDEEDRVKGDYQTRIKFLIVEMSPVTDIDTSGIHAFEELYKSLQKRDVQLVLANPGPVVINKLHTSNFANLIGEDKIYLTVADAVAYCSSKLAEEP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0560 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Prci15g0560 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Prci15g0560 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Prci15g0560 658 Pfam STAS domain 528 646 IPR002645 -
Prci15g0560 658 MobiDBLite consensus disorder prediction 1 32 - -
Prci15g0560 658 Gene3D STAS domain 507 655 IPR036513 -
Prci15g0560 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Prci15g0560 658 FunFam Sulfate transporter 31 507 653 - -
Prci15g0560 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Prci15g0560 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Prci15g0560 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0560 Prci-Chr15 3643805 3648569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0560 1 657 Inorganic Solute Cotransporters AT1G22150 74.734 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0560 K17470 - gmx:100797668 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0526 2 3779043 3782223 Prci15g0560 15 3643805 3648569 CCT
Prci15g0560 15 3643805 3648569 Prci15g0560 15 3643805 3648569 ECH