Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0545 ATGAGTTCTCCATCAACTCAACTTGTCATCTCAAAGAGGATGGGCATATATGAGCCATTCCAGCAAGTCAGCATGTGGGGGGACAACTTTAGAGTTGAAAACAGCCTAAATCCAGGTCCTTCACAAATATTCATGGTGAACCCTACCACAGAGCCCAAGACTGAATATATTCCTCATGAATCGACGGGACCCTCAGGAGATGATCAAGATCAGACTACTACAGCTGTTAGTAAGGTGCTAAGACGCTTGGCACAAAATCGTGAAGCAGCTCGAAAAAGTCGTCTAAGGAAAAAGGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAAAAAGCAGGGTCTGTATATGGGCGGGGCATTAGATGCTACCTATGTAGGAACTTCTGGACCAATAAACCCAGGGATTGCTGCATTTGAGATGGAATATGGGCATTGGGTTGAAGAGCAAAATAGACAAAATGTAGAACTTAGAAACGCATTACAAACTCAGTCACCTGATGTGCAGCTCCATCTACTTGTTCGGAGTGGCTTGAATCATTACTCAAATCTTTTTAAGATGAAAGCTGACGCTGCAAAGGCTGATGTCTTCTATTTAATCTCTGGAGTGTGGAAGGCGTCTGCGGAACGCCTCTTCCTCTGGATCGGAGGATCTCGTCCATCTCAGCTTCTTAGTCTCATCGTGCCACAGGTGGATGACTTGACGGATCAGCAGATAGGAAGTTTCACCAAACTCCGGCATTCTTCTCAGCAAGCTGAAGACGCTCTCTCACAAGGACTGGATAAACTACAACAGAGTCTGGTCCTCAACATGGCAGCCGATGCATTGGACATAGGAAGCTTCGGGTTTCAGATGACTTCTGCCATGGAGAAAATTGAAGCACTAGAGGGTTTTGTAAGCCAGGCAGATCACCTTCGACAACAAACCTTGCAGCATATGTCTCGGATCCTGTCAGCCCGGCAAGCAGCTCAAGGCTTGTTGATCTTAGGGGAATACTTTCAGCGTCTTCGTGCTCTTAGTTCTCTCTGGTCGGCTCGTCCAAGCGATCCTGCATTCCAAACTTGA 1098 0.4608 MSSPSTQLVISKRMGIYEPFQQVSMWGDNFRVENSLNPGPSQIFMVNPTTEPKTEYIPHESTGPSGDDQDQTTTAVSKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIEKAKKQGLYMGGALDATYVGTSGPINPGIAAFEMEYGHWVEEQNRQNVELRNALQTQSPDVQLHLLVRSGLNHYSNLFKMKADAAKADVFYLISGVWKASAERLFLWIGGSRPSQLLSLIVPQVDDLTDQQIGSFTKLRHSSQQAEDALSQGLDKLQQSLVLNMAADALDIGSFGFQMTSAMEKIEALEGFVSQADHLRQQTLQHMSRILSARQAAQGLLILGEYFQRLRALSSLWSARPSDPAFQT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0545 365 Pfam Seed dormancy control 167 239 IPR025422 GO:0006351|GO:0043565
Prci15g0545 365 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Prci15g0545 365 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Prci15g0545 365 Coils Coil 97 124 - -
Prci15g0545 365 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Prci15g0545 365 FunFam BZIP family transcription factor 77 126 - -
Prci15g0545 365 MobiDBLite consensus disorder prediction 54 73 - -
Prci15g0545 365 Gene3D - 77 126 - -
Prci15g0545 365 PANTHER TRANSCRIPTION FACTOR TGA9 1 359 - -
Prci15g0545 365 Pfam bZIP transcription factor 78 108 IPR004827 GO:0003700|GO:0006355
Prci15g0545 365 SUPERFAMILY Leucine zipper domain 78 111 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0545 Prci-Chr15 3548300 3552405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0545 1 361 Calmodulin-binding Proteins AT5G65210 55.313 2.96e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci15g0545 DOG1 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0545 K14431 - gmx:100775882 500.745