Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0541 ATGAGCAATCTGAGAACACTGTGCAGACCGCAACCACTGTTCTCCTTCATTAGTTGCAGACAATTATTCCGATCTAGGGCTTCATTTCGAAGCCCTAATTGCAAGCCTCGTTCAACATCGCCGTCAATATATTCTACATGGTTGGATCCTCCGGGTTCAAGCAGAATGGAGTTTGGGTTTCGCGGCAGCCAGAGGAGAACCCTGGTCAAGGCATCGAATTGGACTGAGCAAAAGTCCCCATATGAAACTCTTGAATTAGAAAGAGATGCTGATGAGGAACAGATAAAGAATGCTTATAGACGCTTGGCCAAATTTTATCACCCAGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCAAGGTTCATAAAGATTCAAGCTGCTTATGAATTACTTATAGATGATGAGAGGCGGCGGCAGTATGATATGGATAACCGAGTGAACCCAATGAAGGCATCTGAGGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGAGGTGATATGGCTATTGCTGCTTGGGCAGAGCAGCAACAGCGTGAGTTAAATATCCGTGCACGTAGTCTATCTCGTTCAAAGATTGATCCAGAAGAAGAAAGGAAAATCCTGGCCAGAGAAAAGAAAGCTTTTGCCGAAAATTTCAACAATACCCTTAAGAGGCATACGCTTGTATTAAAGAAAAGAGATTTAATGCGAAAAAAGGCCGAGGAAGAAAAAAAGAAGACTATCGCTCGGCTGTTGGCTGCAGAGGGTCTTGAGCTTGACTCCGATAGTGATGAGACACTGTAG 816 0.4424 MSNLRTLCRPQPLFSFISCRQLFRSRASFRSPNCKPRSTSPSIYSTWLDPPGSSRMEFGFRGSQRRTLVKASNWTEQKSPYETLELERDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDDERRRQYDMDNRVNPMKASEAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRSKIDPEEERKILAREKKAFAENFNNTLKRHTLVLKKRDLMRKKAEEEKKKTIARLLAAEGLELDSDSDETL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0541 271 Coils Coil 81 101 - -
Prci15g0541 271 SMART dnaj_3 78 142 IPR001623 -
Prci15g0541 271 PANTHER CO-CHAPERONE PROTEIN DJLA 72 258 - -
Prci15g0541 271 FunFam Chaperone protein dnaJ 65 170 - -
Prci15g0541 271 CDD DnaJ 80 139 IPR001623 -
Prci15g0541 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Prci15g0541 271 Gene3D DnaJ domain 67 179 IPR036869 -
Prci15g0541 271 Pfam DnaJ domain 80 147 IPR001623 -
Prci15g0541 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Prci15g0541 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Prci15g0541 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Prci15g0541 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Prci15g0541 271 SUPERFAMILY Chaperone J-domain 73 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0541 Prci-Chr15 3543561 3547728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0541 71 147 C2H2 Transcription Factor Family AT1G74250 36.364 6.38e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0541 - - jre:109021337 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0541 15 3543561 3547728 Prci15g0541 15 3543561 3547728 ECH