Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0534 ATGGGCTCGCTAGAGACACCGACAAGCACGGAAAACGGTTCTGCACCTGTCGCCGGTAACGGGAAAGCTCCCGCTGCCGATGGAGTACCCTTGCCGCACACGGGAGATGTCGAAATGGCTTCGGAGAAGCCGCTGGAATCCGATCAGTCAAAGAAGCGAAGGATTGCTTTGCTTCCCCTGGAGGTTGGTACCAGGGTCTTGTGCCGGTGGAGGGATGGAAAGTTTCACCCTGTAAAAGTCATTGAACGCCGCAAGATTCCAACCGGTGGCCCCAATGATTATGAGTACTACGTCCATTACACTGAGTTTAATAGGAGGCTTGACGAGTGGGTGAAGCTAGAGCAACTTGATCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGATAAGGTGACAAGCTTGAAGATGACACGCCACCAAAAGAGGAAGATTGATGAGACACATGTAGAGGAGGGGCATGAGGAACTTGATGCCGCTAGCTTGCGAGAGCATGAGGAATTTACAAAAGTGAAAAATATAGCCACTATTGAGCTTGGAAGATATGAGATTGAGACTTGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTGTGAAGCTGTACTTTTGTGAATTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGACCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGTACTCTGTCAATGTTTGAGGTTGATGGCAAAAAGAACAAGATTTATGGGCAGAATCTCTGTTATCTGGCAAAGTTGTTTCTTGATCACAAGACCCTCTATTATGATGTAGACTTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGCCATATGGTTGGCTATTTCTCCAAGGAAAAACATTCAGAGGAATCTTATAATTTGGCGTGCATCCTCACCCTTCCACCCTACCAAAGGAAAGGCTATGGCAAATTTCTAATAGCTTTCTCATATGAACTTTCTAAGAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCTGACCTTGGGTTGCTGAGCTACCGAGGATATTGGACCAGGGTTCTTTTGGACATCTTGAAGAAGCATAAGGGTAATATATCTATTAAGGAGCTGAGTGATATGACAGCCATAAAAGCTGAAGATATATTGACTACCCTTCAGAGCCTAGAGTTGATCCAATACAGGAAAGGACAGCATGTTATATGTGCCGATCCAAAAGTTTTGGATCGCCATCTCAAAGCTGCTGGAAGAGGCGGTCTGGAGGTTGATGTCAGCAAATTGATCTGGACTCCTTATAAGGAACAAGGGTGA 1341 0.4534 MGSLETPTSTENGSAPVAGNGKAPAADGVPLPHTGDVEMASEKPLESDQSKKRRIALLPLEVGTRVLCRWRDGKFHPVKVIERRKIPTGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKIYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0534 446 Gene3D - 171 227 - -
Prci15g0534 446 FunFam Histone acetyltransferase 169 226 - -
Prci15g0534 446 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 171 442 IPR016181 -
Prci15g0534 446 FunFam Histone acetyltransferase 229 357 - -
Prci15g0534 446 FunFam Histone acetyltransferase 349 428 - -
Prci15g0534 446 SUPERFAMILY Chromo domain-like 57 171 IPR016197 -
Prci15g0534 446 Gene3D - 229 441 - -
Prci15g0534 446 Gene3D - 349 429 IPR036388 -
Prci15g0534 446 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 170 441 IPR002717 GO:0004402|GO:0006355|GO:0016573
Prci15g0534 446 FunFam Histone acetyltransferase 50 170 - -
Prci15g0534 446 CDD NAT_SF 282 340 - -
Prci15g0534 446 Pfam RNA binding activity-knot of a chromodomain 60 118 IPR025995 -
Prci15g0534 446 MobiDBLite consensus disorder prediction 1 16 - -
Prci15g0534 446 CDD CBD_MOF_like 63 132 - -
Prci15g0534 446 PANTHER HISTONE ACETYLTRANSFERASE 67 442 - -
Prci15g0534 446 MobiDBLite consensus disorder prediction 1 50 - -
Prci15g0534 446 Pfam MYST family zinc finger domain 172 226 IPR040706 -
Prci15g0534 446 Pfam MOZ/SAS family 231 408 IPR002717 GO:0004402|GO:0006355|GO:0016573
Prci15g0534 446 Gene3D - 48 170 - -
Prci15g0534 446 SMART chromo_7 74 133 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0534 Prci-Chr15 3490863 3496199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0534 4 446 C2H2 Transcription Factor Family AT5G64610 85.779 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0534 K11308 - qsa:O6P43_019708 836.254