Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci15g0533 | ATGCTTAAGTGGTTATTTGGTTTGTTGCCGGCGATGACCGGGGGCCGATGTCACCGGAGGAAGAAGATGGAGGGCAGGGGTGCGGAAGGAGGTTGCGGAACCGAGAACATGCCTTGCACGGTTTCGACGGTTCCGGTTAAATCCCCGGGGACCCGACCGGGAAATTCTGATAACTCCACTGCACTTGAAATTGATTACTACTCGCAGGCTATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGACGTTGCGGAAGAGACTTCAACGTCGACGGTGCCTACACTGCCCAGTAGGTGGACAAACTTCTTAAACCGCCACTCTGAAAGTCGTAGGCGGCACAAGAAGTCCTATTCGGGGGCGGACAAGAAATCGTCTAGAGCATGTGAGAAGTCGCGTGGTTCAAACATCTGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACAACTTGTTGGAGGCATCGTCCTCTTTTAGTTTAGCTGCTCAGAAGTGTTTTTCTATTCCACCAGTGGGAAATGCTCCAAGGTCAAATGTAGCTTGTTACGTGGATGACAAGGTGCCTGATGGAAACCTAAATAGCGAGGTTGTGAAGAATGAAGATCGTGTTATGGAAAGTAACAGCGTTGCAGCGGGAGTTTTGGCTCAGGATGACAGGGGTTACGGTACTTTTGAATCGTCCTGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGACTTCTCTCATTTCTGAGCGCCCTTCAAAGAGAAGGAAGCTTTTGGGTGGTGAAGCTGGGTTGGAGAAATTTTTAATGGCTAATCCTTGTGACGGAGACTTTCCACTGTGCCATTATTGCTGCAGGGGAGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGCGTTACTTGTAGAGTTGCAGTTCATAAGAAGTGCTACGGTGTGCAAGATGATGCAGACGAGTCTTGGTTGTGCTCTTGGTGCAAACGAAAGGATTACATCGGTGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCATAGACTTGAGGAAAGTGCTGGGTCTGTGCAATTTGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGCTTACATAGAGGATTTGAAGAAGATGGAGCCTATTATGAATGTAGGAGGAGTTCAGGAATCCCGGAAAAAATTATTCTGTAATATTTGCAAGGTGAAGTTTGGCGCATGTATTCGATGTAGCCATGGATCGTGCAGGTCTTCTTTCCATCCTTTATGTGCTAGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAAAAAATGGTCATGACAATATCGAGTTGCGGGCTTTCTGTTCCAAGCACAGTGCCATCTTGCATTCAGGTGGCTCTGTAGGTTTTGGTAGTGATTTATCTTCTGCTGACAGCCTTCCAGCCGGCAGGCATTACAATTTGAAAATTGGTTGCCAAAATGGAGGCAATGTTGGGATAGTTTGTGATGGTAGTCCTGATAAATTGAGTCATAGTGAACCACCAGATGAAGTGTTGTCTGATTGTCAGTTACATGCTCACGAAACATCAGAATGCAGTAGTTTGCCACAACTAAATGATACTGCAGTGGTGGGGAGGTCTGATGAGATTGCCAATGCACCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATCTGAAAGATGTAGCTTTGGAGATTGGCATTTCTTCAGATTCCTTAAGTGCAAATATTAACGATTCTTGCATGGCCCCTGATGTGCAACTCAAAATAGTCAATTGGCTAAAAGCTCATGTATATACTAATGCATTTCAGAAAAGTTTGAAAGTCAAATTCAAGCCTGCCAATTCATCCAAGGGTGAAATTGGAATCACTGATGGTTCTGATACTCCACAGATATCAGACTCTGAGTTGCCGGATCCTGTTGCCGTTAAGTCAGTGCCATCAAGGAGAAGAACAACCGGTAATATCAGGATTTTGAAAGATAACAAAGCGGTATGTTCACCTGGGGTGATCTCTAGTGAGAACGGAGTGCTAATGGACAAGGTCAAAGGAGGTCAATCTGAACATGAAAATTCTGAAACATCAAATGAGGCATCCATTCCTGATACAACTGAAACGAAATTAACCAAGTCTGAGGATGCATTTTCTGATTCACAAGGGAATGCACATAAACGTGGCAAAATAGGCTTATCTGGAGGTGTTTTGGAAGAAAAGCTTGCTATTGATTCTATTTCTTCTGGTCACCACCATTCTTCTTGTTCTGCTGCAGAGTTACCTGCTTCTGGTTTCATGAAGATTGAAGGAAACTCTTGGTACATTCACCCACACGTCCATAAAAAGTTATCACAGATTCATGATGGGGTGCTTTCAAAGGATGTTATATGTCAAAGGGAGGAAGAAAATTTTCATTTGGATGGATCCTCAGGGGCTAGTGGTGGCTCTAGTCACCAAAATCCAGGAGTAACTTGCAGTGACATTTGTAAGGCTGATAGAGTAAATACAGAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCGAAAGATGAAGTGGAGGGTGAACTAATATATTTTCAACATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAGTTTGCTGATAATTTAATTGCAAGTATAGCTAGGAGTCTCCCGCAGGAGATTGACACAACACACCAGCAAAGGTGGGATGCTGTACTTGTTAACGAGTATCTCCGTGATCTTAGGGAAGCAATAAAGCAAGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAAGCAGTGTTGGCTGCTGCAACTGCAGCAGCAGCATCATCATCTAGGGTTTCTTCATTACGGAAGGATGCCTTTGAAGAATCTGTACTGCCTGAGAATTTGTTAAAGCACACTTTCAGTGGGAGGACTGGTGTTTTCTCTCAGCCAATGCCGCGGGCAAAAGAAACACTTTCAAGAGTAGCTATGGTTAGGACTTCATCAGGAAAACATTCAGATCTCGGTCTGCCAGCTGCAGATTTTTCTAAGGAACATCCCAAATCATGTGATACATGTAGACGGTCTGAAACTATATTGAACCCAATTCTTATCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTACTGTGAATTGTGTGAAGATTTATCATCTAGAGTATCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTTCCGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTGGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTCTGTTGAAAGGAGTTGACACTTGTTGCATCTGCCGCCGCAAGCATGGTGTATGCTTAAAATGTAGCTATGGCCATTGTCAGACCACATTTCATCCATCCTGCGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCGGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGATCAGAGGGCAAAGGCTGAGAGCCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAAGCGAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTCTATGTTCACACGACATACTTGCCTTGAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTTCATAGCCCTTTCATCCTTCCTGATTGTAGTTCAGAATCAGCTACGACATCCCTTAAAGGGAACACGGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTGTCTGCTAAGCGTCGATTACATGTGGCTGTTACCATGGACAGTGACCCAAAGTTGGAAGATGACTGTTCAACTTCACAAAGCCATTATAATCATAAGAATCCTGAGAGGGTGCAGTTTTCGGGCAAGCAGATTCCTCACAGAGCTTCCATCATATCAAGAAATCTTTCGGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCTAATGACAAGCGATCTAAGCAGGACGTATTTACTAGTGAACCAGAGGAGCGCAATGGGTAG | 4305 | 0.4397 | MLKWLFGLLPAMTGGRCHRRKKMEGRGAEGGCGTENMPCTVSTVPVKSPGTRPGNSDNSTALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSRWTNFLNRHSESRRRHKKSYSGADKKSSRACEKSRGSNIWVETEDYFRDLKLPDIDNLLEASSSFSLAAQKCFSIPPVGNAPRSNVACYVDDKVPDGNLNSEVVKNEDRVMESNSVAAGVLAQDDRGYGTFESSCSLEWLLGCRNKTSLISERPSKRRKLLGGEAGLEKFLMANPCDGDFPLCHYCCRGDTSRESNQLIVCVTCRVAVHKKCYGVQDDADESWLCSWCKRKDYIGEMVHPCVLCPKKGGALKPVHRLEESAGSVQFAHLFCCLWMPEAYIEDLKKMEPIMNVGGVQESRKKLFCNICKVKFGACIRCSHGSCRSSFHPLCAREASHRMEVWAKNGHDNIELRAFCSKHSAILHSGGSVGFGSDLSSADSLPAGRHYNLKIGCQNGGNVGIVCDGSPDKLSHSEPPDEVLSDCQLHAHETSECSSLPQLNDTAVVGRSDEIANAPDSLGFALVLKKLIDRGKVDLKDVALEIGISSDSLSANINDSCMAPDVQLKIVNWLKAHVYTNAFQKSLKVKFKPANSSKGEIGITDGSDTPQISDSELPDPVAVKSVPSRRRTTGNIRILKDNKAVCSPGVISSENGVLMDKVKGGQSEHENSETSNEASIPDTTETKLTKSEDAFSDSQGNAHKRGKIGLSGGVLEEKLAIDSISSGHHHSSCSAAELPASGFMKIEGNSWYIHPHVHKKLSQIHDGVLSKDVICQREEENFHLDGSSGASGGSSHQNPGVTCSDICKADRVNTEQLVMARNMGLLESCPKDEVEGELIYFQHRLLQNAVARKKFADNLIASIARSLPQEIDTTHQQRWDAVLVNEYLRDLREAIKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDAFEESVLPENLLKHTFSGRTGVFSQPMPRAKETLSRVAMVRTSSGKHSDLGLPAADFSKEHPKSCDTCRRSETILNPILICSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSSRVSGQPSINSWEKPYFVAECGICGGTSGAYRKSSDGHWVHAFCAEWVLESTFRRGQVNAVEGMETLLKGVDTCCICRRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAAGGKLQHRAYCEKHGSDQRAKAESQKHGIEELKSIKRIRVELERLRLLCERIVKREKIKRELVLCSHDILALKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKRRLHVAVTMDSDPKLEDDCSTSQSHYNHKNPERVQFSGKQIPHRASIISRNLSDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTSEPEERNG | 1434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci15g0533 | 1434 | CDD | ePHD | 1094 | 1199 | - | - | |
Prci15g0533 | 1434 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 269 | 331 | IPR013083 | - | |
Prci15g0533 | 1434 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1007 | 1078 | IPR013083 | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 721 | 740 | - | - | |
Prci15g0533 | 1434 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 332 | 457 | IPR013083 | - | |
Prci15g0533 | 1434 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1091 | 1202 | IPR013083 | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 627 | 660 | - | - | |
Prci15g0533 | 1434 | SMART | PHD_3 | 399 | 455 | IPR001965 | - | |
Prci15g0533 | 1434 | SMART | PHD_3 | 1025 | 1070 | IPR001965 | - | |
Prci15g0533 | 1434 | SMART | PHD_3 | 278 | 325 | IPR001965 | - | |
Prci15g0533 | 1434 | SMART | PHD_3 | 1146 | 1200 | IPR001965 | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 702 | 716 | - | - | |
Prci15g0533 | 1434 | Coils | Coil | 919 | 939 | - | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 693 | 716 | - | - | |
Prci15g0533 | 1434 | ProSitePatterns | Zinc finger PHD-type signature. | 279 | 324 | IPR019786 | - | |
Prci15g0533 | 1434 | ProSiteProfiles | Zinc finger PHD-type profile. | 276 | 327 | IPR019787 | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 631 | 645 | - | - | |
Prci15g0533 | 1434 | SUPERFAMILY | FYVE/PHD zinc finger | 269 | 343 | IPR011011 | - | |
Prci15g0533 | 1434 | ProSiteProfiles | Zinc finger PHD-type profile. | 1023 | 1072 | IPR019787 | - | |
Prci15g0533 | 1434 | Pfam | PHD-zinc-finger like domain | 1093 | 1199 | - | - | |
Prci15g0533 | 1434 | Pfam | PHD-zinc-finger like domain | 336 | 454 | - | - | |
Prci15g0533 | 1434 | Pfam | PHD-finger | 292 | 325 | - | - | |
Prci15g0533 | 1434 | Pfam | PHD-finger | 1037 | 1070 | - | - | |
Prci15g0533 | 1434 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 334 | 455 | IPR034732 | - | |
Prci15g0533 | 1434 | PANTHER | PHD FINGER PROTEINS | 84 | 962 | - | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 105 | 125 | - | - | |
Prci15g0533 | 1434 | ProSitePatterns | Zinc finger PHD-type signature. | 1026 | 1069 | IPR019786 | - | |
Prci15g0533 | 1434 | SUPERFAMILY | FYVE/PHD zinc finger | 1017 | 1071 | IPR011011 | - | |
Prci15g0533 | 1434 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1091 | 1200 | IPR034732 | - | |
Prci15g0533 | 1434 | Coils | Coil | 1220 | 1240 | - | - | |
Prci15g0533 | 1434 | MobiDBLite | consensus disorder prediction | 1327 | 1357 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci15g0533 | Prci-Chr15 | 3461833 | 3481776 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci15g0533 | 292 | 457 | C2H2 Transcription Factor Family | AT3G14740 | 31.361 | 1.02e-15 | 78.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci15g0533 | - | - | gmx:100777481 | 1714.89 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci15g0533 | 15 | 3461833 | 3481776 | Prci15g0533 | 15 | 3461833 | 3481776 | ECH |