Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0533 ATGCTTAAGTGGTTATTTGGTTTGTTGCCGGCGATGACCGGGGGCCGATGTCACCGGAGGAAGAAGATGGAGGGCAGGGGTGCGGAAGGAGGTTGCGGAACCGAGAACATGCCTTGCACGGTTTCGACGGTTCCGGTTAAATCCCCGGGGACCCGACCGGGAAATTCTGATAACTCCACTGCACTTGAAATTGATTACTACTCGCAGGCTATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGACGTTGCGGAAGAGACTTCAACGTCGACGGTGCCTACACTGCCCAGTAGGTGGACAAACTTCTTAAACCGCCACTCTGAAAGTCGTAGGCGGCACAAGAAGTCCTATTCGGGGGCGGACAAGAAATCGTCTAGAGCATGTGAGAAGTCGCGTGGTTCAAACATCTGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACAACTTGTTGGAGGCATCGTCCTCTTTTAGTTTAGCTGCTCAGAAGTGTTTTTCTATTCCACCAGTGGGAAATGCTCCAAGGTCAAATGTAGCTTGTTACGTGGATGACAAGGTGCCTGATGGAAACCTAAATAGCGAGGTTGTGAAGAATGAAGATCGTGTTATGGAAAGTAACAGCGTTGCAGCGGGAGTTTTGGCTCAGGATGACAGGGGTTACGGTACTTTTGAATCGTCCTGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGACTTCTCTCATTTCTGAGCGCCCTTCAAAGAGAAGGAAGCTTTTGGGTGGTGAAGCTGGGTTGGAGAAATTTTTAATGGCTAATCCTTGTGACGGAGACTTTCCACTGTGCCATTATTGCTGCAGGGGAGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGCGTTACTTGTAGAGTTGCAGTTCATAAGAAGTGCTACGGTGTGCAAGATGATGCAGACGAGTCTTGGTTGTGCTCTTGGTGCAAACGAAAGGATTACATCGGTGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCATAGACTTGAGGAAAGTGCTGGGTCTGTGCAATTTGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGCTTACATAGAGGATTTGAAGAAGATGGAGCCTATTATGAATGTAGGAGGAGTTCAGGAATCCCGGAAAAAATTATTCTGTAATATTTGCAAGGTGAAGTTTGGCGCATGTATTCGATGTAGCCATGGATCGTGCAGGTCTTCTTTCCATCCTTTATGTGCTAGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAAAAAATGGTCATGACAATATCGAGTTGCGGGCTTTCTGTTCCAAGCACAGTGCCATCTTGCATTCAGGTGGCTCTGTAGGTTTTGGTAGTGATTTATCTTCTGCTGACAGCCTTCCAGCCGGCAGGCATTACAATTTGAAAATTGGTTGCCAAAATGGAGGCAATGTTGGGATAGTTTGTGATGGTAGTCCTGATAAATTGAGTCATAGTGAACCACCAGATGAAGTGTTGTCTGATTGTCAGTTACATGCTCACGAAACATCAGAATGCAGTAGTTTGCCACAACTAAATGATACTGCAGTGGTGGGGAGGTCTGATGAGATTGCCAATGCACCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATCTGAAAGATGTAGCTTTGGAGATTGGCATTTCTTCAGATTCCTTAAGTGCAAATATTAACGATTCTTGCATGGCCCCTGATGTGCAACTCAAAATAGTCAATTGGCTAAAAGCTCATGTATATACTAATGCATTTCAGAAAAGTTTGAAAGTCAAATTCAAGCCTGCCAATTCATCCAAGGGTGAAATTGGAATCACTGATGGTTCTGATACTCCACAGATATCAGACTCTGAGTTGCCGGATCCTGTTGCCGTTAAGTCAGTGCCATCAAGGAGAAGAACAACCGGTAATATCAGGATTTTGAAAGATAACAAAGCGGTATGTTCACCTGGGGTGATCTCTAGTGAGAACGGAGTGCTAATGGACAAGGTCAAAGGAGGTCAATCTGAACATGAAAATTCTGAAACATCAAATGAGGCATCCATTCCTGATACAACTGAAACGAAATTAACCAAGTCTGAGGATGCATTTTCTGATTCACAAGGGAATGCACATAAACGTGGCAAAATAGGCTTATCTGGAGGTGTTTTGGAAGAAAAGCTTGCTATTGATTCTATTTCTTCTGGTCACCACCATTCTTCTTGTTCTGCTGCAGAGTTACCTGCTTCTGGTTTCATGAAGATTGAAGGAAACTCTTGGTACATTCACCCACACGTCCATAAAAAGTTATCACAGATTCATGATGGGGTGCTTTCAAAGGATGTTATATGTCAAAGGGAGGAAGAAAATTTTCATTTGGATGGATCCTCAGGGGCTAGTGGTGGCTCTAGTCACCAAAATCCAGGAGTAACTTGCAGTGACATTTGTAAGGCTGATAGAGTAAATACAGAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCGAAAGATGAAGTGGAGGGTGAACTAATATATTTTCAACATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAGTTTGCTGATAATTTAATTGCAAGTATAGCTAGGAGTCTCCCGCAGGAGATTGACACAACACACCAGCAAAGGTGGGATGCTGTACTTGTTAACGAGTATCTCCGTGATCTTAGGGAAGCAATAAAGCAAGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAAGCAGTGTTGGCTGCTGCAACTGCAGCAGCAGCATCATCATCTAGGGTTTCTTCATTACGGAAGGATGCCTTTGAAGAATCTGTACTGCCTGAGAATTTGTTAAAGCACACTTTCAGTGGGAGGACTGGTGTTTTCTCTCAGCCAATGCCGCGGGCAAAAGAAACACTTTCAAGAGTAGCTATGGTTAGGACTTCATCAGGAAAACATTCAGATCTCGGTCTGCCAGCTGCAGATTTTTCTAAGGAACATCCCAAATCATGTGATACATGTAGACGGTCTGAAACTATATTGAACCCAATTCTTATCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTACTGTGAATTGTGTGAAGATTTATCATCTAGAGTATCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTTCCGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTGGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTCTGTTGAAAGGAGTTGACACTTGTTGCATCTGCCGCCGCAAGCATGGTGTATGCTTAAAATGTAGCTATGGCCATTGTCAGACCACATTTCATCCATCCTGCGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCGGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGATCAGAGGGCAAAGGCTGAGAGCCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAAGCGAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTCTATGTTCACACGACATACTTGCCTTGAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTTCATAGCCCTTTCATCCTTCCTGATTGTAGTTCAGAATCAGCTACGACATCCCTTAAAGGGAACACGGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTGTCTGCTAAGCGTCGATTACATGTGGCTGTTACCATGGACAGTGACCCAAAGTTGGAAGATGACTGTTCAACTTCACAAAGCCATTATAATCATAAGAATCCTGAGAGGGTGCAGTTTTCGGGCAAGCAGATTCCTCACAGAGCTTCCATCATATCAAGAAATCTTTCGGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCTAATGACAAGCGATCTAAGCAGGACGTATTTACTAGTGAACCAGAGGAGCGCAATGGGTAG 4305 0.4397 MLKWLFGLLPAMTGGRCHRRKKMEGRGAEGGCGTENMPCTVSTVPVKSPGTRPGNSDNSTALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSRWTNFLNRHSESRRRHKKSYSGADKKSSRACEKSRGSNIWVETEDYFRDLKLPDIDNLLEASSSFSLAAQKCFSIPPVGNAPRSNVACYVDDKVPDGNLNSEVVKNEDRVMESNSVAAGVLAQDDRGYGTFESSCSLEWLLGCRNKTSLISERPSKRRKLLGGEAGLEKFLMANPCDGDFPLCHYCCRGDTSRESNQLIVCVTCRVAVHKKCYGVQDDADESWLCSWCKRKDYIGEMVHPCVLCPKKGGALKPVHRLEESAGSVQFAHLFCCLWMPEAYIEDLKKMEPIMNVGGVQESRKKLFCNICKVKFGACIRCSHGSCRSSFHPLCAREASHRMEVWAKNGHDNIELRAFCSKHSAILHSGGSVGFGSDLSSADSLPAGRHYNLKIGCQNGGNVGIVCDGSPDKLSHSEPPDEVLSDCQLHAHETSECSSLPQLNDTAVVGRSDEIANAPDSLGFALVLKKLIDRGKVDLKDVALEIGISSDSLSANINDSCMAPDVQLKIVNWLKAHVYTNAFQKSLKVKFKPANSSKGEIGITDGSDTPQISDSELPDPVAVKSVPSRRRTTGNIRILKDNKAVCSPGVISSENGVLMDKVKGGQSEHENSETSNEASIPDTTETKLTKSEDAFSDSQGNAHKRGKIGLSGGVLEEKLAIDSISSGHHHSSCSAAELPASGFMKIEGNSWYIHPHVHKKLSQIHDGVLSKDVICQREEENFHLDGSSGASGGSSHQNPGVTCSDICKADRVNTEQLVMARNMGLLESCPKDEVEGELIYFQHRLLQNAVARKKFADNLIASIARSLPQEIDTTHQQRWDAVLVNEYLRDLREAIKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDAFEESVLPENLLKHTFSGRTGVFSQPMPRAKETLSRVAMVRTSSGKHSDLGLPAADFSKEHPKSCDTCRRSETILNPILICSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSSRVSGQPSINSWEKPYFVAECGICGGTSGAYRKSSDGHWVHAFCAEWVLESTFRRGQVNAVEGMETLLKGVDTCCICRRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAAGGKLQHRAYCEKHGSDQRAKAESQKHGIEELKSIKRIRVELERLRLLCERIVKREKIKRELVLCSHDILALKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKRRLHVAVTMDSDPKLEDDCSTSQSHYNHKNPERVQFSGKQIPHRASIISRNLSDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTSEPEERNG 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0533 1434 CDD ePHD 1094 1199 - -
Prci15g0533 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 331 IPR013083 -
Prci15g0533 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1007 1078 IPR013083 -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 721 740 - -
Prci15g0533 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 457 IPR013083 -
Prci15g0533 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1091 1202 IPR013083 -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 627 660 - -
Prci15g0533 1434 SMART PHD_3 399 455 IPR001965 -
Prci15g0533 1434 SMART PHD_3 1025 1070 IPR001965 -
Prci15g0533 1434 SMART PHD_3 278 325 IPR001965 -
Prci15g0533 1434 SMART PHD_3 1146 1200 IPR001965 -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 702 716 - -
Prci15g0533 1434 Coils Coil 919 939 - -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 693 716 - -
Prci15g0533 1434 ProSitePatterns Zinc finger PHD-type signature. 279 324 IPR019786 -
Prci15g0533 1434 ProSiteProfiles Zinc finger PHD-type profile. 276 327 IPR019787 -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 631 645 - -
Prci15g0533 1434 SUPERFAMILY FYVE/PHD zinc finger 269 343 IPR011011 -
Prci15g0533 1434 ProSiteProfiles Zinc finger PHD-type profile. 1023 1072 IPR019787 -
Prci15g0533 1434 Pfam PHD-zinc-finger like domain 1093 1199 - -
Prci15g0533 1434 Pfam PHD-zinc-finger like domain 336 454 - -
Prci15g0533 1434 Pfam PHD-finger 292 325 - -
Prci15g0533 1434 Pfam PHD-finger 1037 1070 - -
Prci15g0533 1434 ProSiteProfiles Extended PHD (ePHD) domain profile. 334 455 IPR034732 -
Prci15g0533 1434 PANTHER PHD FINGER PROTEINS 84 962 - -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 105 125 - -
Prci15g0533 1434 ProSitePatterns Zinc finger PHD-type signature. 1026 1069 IPR019786 -
Prci15g0533 1434 SUPERFAMILY FYVE/PHD zinc finger 1017 1071 IPR011011 -
Prci15g0533 1434 ProSiteProfiles Extended PHD (ePHD) domain profile. 1091 1200 IPR034732 -
Prci15g0533 1434 Coils Coil 1220 1240 - -
Prci15g0533 1434 MobiDBLite consensus disorder prediction 1327 1357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0533 Prci-Chr15 3461833 3481776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0533 292 457 C2H2 Transcription Factor Family AT3G14740 31.361 1.02e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0533 - - gmx:100777481 1714.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0533 15 3461833 3481776 Prci15g0533 15 3461833 3481776 ECH