Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0532 ATGCTTAAGTGGTTATTTGGTTTGTTGCCGGCGATGACCGGGGGCCGATGTCACCGGAGGAAGAAGATGGAGGGCAGGGGTGCGGAAGGAGGTTGCGGAACCGAGAACATGCCTTGCACGGTTTCGACGGTTCCGGTTAAATCCCCGGGGACCCGACCGGGAAATTCTGATAACTCCACTGCACTTGAAATTGATTACTACTCGCAGGCTATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGACGTTGCGGAAGAGACTTCAACGTCGACGGTGCCTACACTGCCCAGTAGGTGGACAAACTTCTTAAACCGCCACTCTGAAAGTCGTAGGCGGCACAAGAAGTCCTATTCGGGGGCGGACAAGAAATCGTCTAGAGCATGTGAGAAGTCGCGTGGTTCAAACATCTGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACAACTTGTTGGAGGCATCGTCCTCTTTTAGTTTAGCTGCTCAGAAGTGTTTTTCTATTCCACCAGTGGGAAATGCTCCAAGGTCAAATGTAGCTTGTTACGTGGATGACAAGGTGCCTGATGGAAACCTAAATAGCGAGGTTGTGAAGAATGAAGATCGTGTTATGGAAAGTAACAGCGTTGCAGCGGGAGTTTTGGCTCAGGATGACAGGGGTTACGGTACTTTTGAATCGTCCTGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGACTTCTCTCATTTCTGAGCGCCCTTCAAAGAGAAGGAAGCTTTTGGGTGGTGAAGCTGGGTTGGAGAAATTTTTAATGGCTAATCCTTGTGACGGAGACTTTCCACTGTGCCATTATTGCTGCAGGGGAGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGCGTTACTTGTAGAGTTGCAGTTCATAAGAAGTGCTACGGTGTGCAAGATGATGCAGACGAGTCTTGGTTGTGCTCTTGGTGCAAACGAAAGGATTACATCGGTGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCATAGACTTGAGGAAAGTGCTGGGTCTGTGCAATTTGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGCTTACATAGAGGATTTGAAGAAGATGGAGCCTATTATGAATGTAGGAGGAGTTCAGGAATCCCGGAAAAAATTATTCTGTAATATTTGCAAGGTGAAGTTTGGCGCATGTATTCGATGTAGCCATGGATCGTGCAGGTCTTCTTTCCATCCTTTATGTGCTAGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAAAAAATGGTCATGACAATATCGAGTTGCGGGCTTTCTGTTCCAAGCACAGTGCCATCTTGCATTCAGGTGGCTCTGTAGGTTTTGGTAGTGATTTATCTTCTGCTGACAGCCTTCCAGCCGGCAGGCATTACAATTTGAAAATTGGTTGCCAAAATGGAGGCAATGTTGGGATAGTTTGTGATGGTAGTCCTGATAAATTGAGTCATAGTGAACCACCAGATGAAGTGTTGTCTGATTGTCAGTTACATGCTCACGAAACATCAGAATGCAGTAGTTTGCCACAACTAAATGATACTGCAGTGGTGGGGAGGTCTGATGAGATTGCCAATGCACCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATCTGAAAGATGTAGCTTTGGAGATTGGCATTTCTTCAGATTCCTTAAGTGCAAATATTAACGATTCTTGCATGGCCCCTGATGTGCAACTCAAAATAGTCAATTGGCTAAAAGCTCATATATCAGACTCTGAGTTGCCGGATCCTGTTGCCGTTAAGTCAGTGCCATCAAGGAGAAGAACAACCGGTAATATCAGGATTTTGAAAGATAACAAAGCGGTATGTTCACCTGGGGTGATCTCTAGTGAGAACGGAGTGCTAATGGACAAGGTCAAAGGAGGTCAATCTGAACATGAAAATTCTGAAACATCAAATGAGGCATCCATTCCTGATACAACTGAAACGAAATTAACCAAGTCTGAGGATGCATTTTCTGATTCACAAGGGAATGCACATAAACGTGGCAAAATAGGCTTATCTGGAGGTGTTTTGGAAGAAAAGCTTGCTATTGATTCTATTTCTTCTGGTCACCACCATTCTTCTTGTTCTGCTGCAGAGTTACCTGCTTCTGGTTTCATGAAGATTGAAGGAAACTCTTGGTACATTCACCCACACGTCCATAAAAAGTTATCACAGATTCATGATGGGGTGCTTTCAAAGGATGTTATATGTCAAAGGGAGGAAGAAAATTTTCATTTGGATGGATCCTCAGGGGCTAGTGGTGGCTCTAGTCACCAAAATCCAGGAGTAACTTGCAGTGACATTTGTAAGGCTGATAGAGTAAATACAGAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCGAAAGATGAAGTGGAGGGTGAACTAATATATTTTCAACATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAGTTTGCTGATAATTTAATTGCAAGTATAGCTAGGAGTCTCCCGCAGGAGATTGACACAACACACCAGCAAAGGTGGGATGCTGTACTTGTTAACGAGTATCTCCGTGATCTTAGGGAAGCAATAAAGCAAGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAAGCAGTGTTGGCTGCTGCAACTGCAGCAGCAGCATCATCATCTAGGGTTTCTTCATTACGGAAGGATGCCTTTGAAGAATCTGTACTGCCTGAGAATTTGTTAAAGCACACTTTCAGTGGGAGGACTGGTGTTTTCTCTCAGCCAATGCCGCGGGCAAAAGAAACACTTTCAAGAGTAGCTATGGTTAGGACTTCATCAGGAAAACATTCAGATCTCGGTCTGCCAGCTGCAGATTTTTCTAAGGAACATCCCAAATCATGTGATACATGTAGACGGTCTGAAACTATATTGAACCCAATTCTTATCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTACTGTGAATTGTGTGAAGATTTATCATCTAGAGTATCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTTCCGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTGGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTCTGTTGAAAGGAGTTGACACTTGTTGCATCTGCCGCCGCAAGCATGGTGTATGCTTAAAATGTAGCTATGGCCATTGTCAGACCACATTTCATCCATCCTGCGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCGGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGATCAGAGGGCAAAGGCTGAGAGCCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAAGCGAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTCTATGTTCACACGACATACTTGCCTTGAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTTCATAGCCCTTTCATCCTTCCTGATTGTAGTTCAGAATCAGCTACGACATCCCTTAAAGGGAACACGGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTGTCTGCTAAGCGTCGATTACATGTGGCTGTTACCATGGACAGTGACCCAAAGTTGGAAGATGACTGTTCAACTTCACAAAGCCATTATAATCATAAGAATCCTGAGAGGGTGCAGTTTTCGGGCAAGCAGATTCCTCACAGAGCTTCCATCATATCAAGAAATCTTTCGGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCTAATGACAAGCGATCTAAGCAGGACGTATTTACTAGTGAACCAGAGGAGCGCAATGGGTAG 4203 0.4414 MLKWLFGLLPAMTGGRCHRRKKMEGRGAEGGCGTENMPCTVSTVPVKSPGTRPGNSDNSTALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSRWTNFLNRHSESRRRHKKSYSGADKKSSRACEKSRGSNIWVETEDYFRDLKLPDIDNLLEASSSFSLAAQKCFSIPPVGNAPRSNVACYVDDKVPDGNLNSEVVKNEDRVMESNSVAAGVLAQDDRGYGTFESSCSLEWLLGCRNKTSLISERPSKRRKLLGGEAGLEKFLMANPCDGDFPLCHYCCRGDTSRESNQLIVCVTCRVAVHKKCYGVQDDADESWLCSWCKRKDYIGEMVHPCVLCPKKGGALKPVHRLEESAGSVQFAHLFCCLWMPEAYIEDLKKMEPIMNVGGVQESRKKLFCNICKVKFGACIRCSHGSCRSSFHPLCAREASHRMEVWAKNGHDNIELRAFCSKHSAILHSGGSVGFGSDLSSADSLPAGRHYNLKIGCQNGGNVGIVCDGSPDKLSHSEPPDEVLSDCQLHAHETSECSSLPQLNDTAVVGRSDEIANAPDSLGFALVLKKLIDRGKVDLKDVALEIGISSDSLSANINDSCMAPDVQLKIVNWLKAHISDSELPDPVAVKSVPSRRRTTGNIRILKDNKAVCSPGVISSENGVLMDKVKGGQSEHENSETSNEASIPDTTETKLTKSEDAFSDSQGNAHKRGKIGLSGGVLEEKLAIDSISSGHHHSSCSAAELPASGFMKIEGNSWYIHPHVHKKLSQIHDGVLSKDVICQREEENFHLDGSSGASGGSSHQNPGVTCSDICKADRVNTEQLVMARNMGLLESCPKDEVEGELIYFQHRLLQNAVARKKFADNLIASIARSLPQEIDTTHQQRWDAVLVNEYLRDLREAIKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDAFEESVLPENLLKHTFSGRTGVFSQPMPRAKETLSRVAMVRTSSGKHSDLGLPAADFSKEHPKSCDTCRRSETILNPILICSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSSRVSGQPSINSWEKPYFVAECGICGGTSGAYRKSSDGHWVHAFCAEWVLESTFRRGQVNAVEGMETLLKGVDTCCICRRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAAGGKLQHRAYCEKHGSDQRAKAESQKHGIEELKSIKRIRVELERLRLLCERIVKREKIKRELVLCSHDILALKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKRRLHVAVTMDSDPKLEDDCSTSQSHYNHKNPERVQFSGKQIPHRASIISRNLSDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTSEPEERNG 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0532 1400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1057 1168 IPR013083 -
Prci15g0532 1400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 457 IPR013083 -
Prci15g0532 1400 Coils Coil 885 905 - -
Prci15g0532 1400 SUPERFAMILY FYVE/PHD zinc finger 983 1037 IPR011011 -
Prci15g0532 1400 Coils Coil 1186 1206 - -
Prci15g0532 1400 MobiDBLite consensus disorder prediction 1293 1323 - -
Prci15g0532 1400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 973 1044 IPR013083 -
Prci15g0532 1400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 331 IPR013083 -
Prci15g0532 1400 ProSitePatterns Zinc finger PHD-type signature. 279 324 IPR019786 -
Prci15g0532 1400 ProSiteProfiles Extended PHD (ePHD) domain profile. 1057 1166 IPR034732 -
Prci15g0532 1400 ProSiteProfiles Zinc finger PHD-type profile. 276 327 IPR019787 -
Prci15g0532 1400 Pfam PHD-finger 1003 1036 - -
Prci15g0532 1400 Pfam PHD-finger 292 325 - -
Prci15g0532 1400 Pfam PHD-zinc-finger like domain 1059 1165 - -
Prci15g0532 1400 Pfam PHD-zinc-finger like domain 336 454 - -
Prci15g0532 1400 SUPERFAMILY FYVE/PHD zinc finger 269 343 IPR011011 -
Prci15g0532 1400 MobiDBLite consensus disorder prediction 683 697 - -
Prci15g0532 1400 CDD ePHD 1060 1165 - -
Prci15g0532 1400 ProSitePatterns Zinc finger PHD-type signature. 992 1035 IPR019786 -
Prci15g0532 1400 ProSiteProfiles Extended PHD (ePHD) domain profile. 334 455 IPR034732 -
Prci15g0532 1400 SMART PHD_3 399 455 IPR001965 -
Prci15g0532 1400 SMART PHD_3 991 1036 IPR001965 -
Prci15g0532 1400 SMART PHD_3 278 325 IPR001965 -
Prci15g0532 1400 SMART PHD_3 1112 1166 IPR001965 -
Prci15g0532 1400 MobiDBLite consensus disorder prediction 105 125 - -
Prci15g0532 1400 PANTHER PHD FINGER PROTEINS 84 928 - -
Prci15g0532 1400 MobiDBLite consensus disorder prediction 668 682 - -
Prci15g0532 1400 MobiDBLite consensus disorder prediction 659 706 - -
Prci15g0532 1400 ProSiteProfiles Zinc finger PHD-type profile. 989 1038 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0532 Prci-Chr15 3461832 3481776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0532 292 457 C2H2 Transcription Factor Family AT3G14740 31.361 1.13e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0532 - - gmx:100777481 1652.49