Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0525 ATGCTTGAAGCACTCGTGCGCGATGAGCCCACTGACGATCTTTCCAGCTCCAAGAAGGGTAAATCAGAGGCCGATAAGATAAACAAGGACGGCCAGAAGCCATCCCCGCCGGTTGTTGTGGTTGCCCGGAGTCGCTCCCAGGGGGGCACACGAAGAGTCACCCCTACCGGCATATCCATCGCCTCTGATTGCTCGACTTCCACAGTAGAGAAGCATTTACCTAACGGCGATTTTTACATGGGCAGCTTTTCCGGCAATGTTCCTCACGGATCGGGGAAATACTTGTGGACCGACGGGTGCATGTACGAGGGGCAGTGGAAGAGAGGCAAAGCTGCTGGGAAAGGCAAATTTTCTTGGCCCTCCGGAGCGACATATGAGGGCGAATTTAAAGCGGGTCGGATGGAAGGATTCGGTACTTTCACCGGATCCGATGGCGACACTTACCGCGGCACCTGGAGTGCCGACCGGAAACATGGGCACGGGCAGAAGCGCTACGCCAACGGCGATTTCTATGAAGGGTCGTGGAAGCGGAACCTTCAGGATGGCCGGGGCCGGTATGTATGGATTAACGGGAACGAGTATGTTGGCGAGTGGAAGAACGGTGTAATCTCTGGAAGAGGTGTGCTTGTTTGGGCGAATGGCAATCGGTATGAAGGGCAATGGGAGAACGGGGTTCCCAAAGGCCAAGGGATTTTCACTTGGCCTGATGGAAGCTGCTATATAGGTGACTGGAACAAGGATATGGAAATACAGCAGTTGAATGGCACTTTCTACCCTGGTTATGGCAAAGAGAACTATCTTAAGAGCAATGGCCCATTGACGGGTGATAATTTGACAATAACGATGAGGAAGAGGTCATCCGTGGACGGTGCTAGAAGGAGTATGACTGAGAAGAATTTTCCGAGAATTTGCATATGGGAATCAGACGGAGAAGCGGGTGATATAACCTGTGATATAATCGATAATGTGGAAGCATCCATGTTTTATAGGGATGGGAAGGGGTTGGAACGTGATGACATTAAACAGTTTCGGCGGAACTCTTGGTGTTGCTCCCGGGAGGTGAAAAGACCAGGGCAAACCATATTCAAGGGGCACAAGAATTACGATTTAATGCTTAATCTGCAATTGGGCATAAGATACTCTGTTGGGAAGGAAGCTTCTATATCGCGAGAGCTTAAACCAAGTGATTTCGATCCGAAGGAGAAGTTCTGGACCAGGTTTCCTCCGGAAGGATCCAAGATTACCCCACCTCATCAATCAGTGGAGTTCCGGTGGAAAGATTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCTATTCCAAGTGGATCCTGGTGATTACATGTTAGCTATATGCGGGGACGATGCCCTTAGGGAGCTTTCTTCTCCGGGGAAGAGTGGAAGCATCTTCTACTTGACTCAGGACGACCGATTCATGATAAAGACAGTGAGGAAATCTGAAGTCAAGGTGCTTATTCGGATGCTTCGAAGTTATTACCGACATGTTTCTAAATACGATAATTCACTGGTGACGAGGTTCTATGGGGTACACTGTGTCAAACCAATTGGAGGGCAAAAGACACGGTTCATTGTGATGGGAAATCTTTTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAAGGATCTTCTCATGGCCGAATAACAGATAAGCCTGAGAGGGAGATTGACGAGACTACAACCTTGAAGGACCTTGATCTCAATTTTGTCTTTCGTCTGCAGCAAAATTGGTACCAGGATTTCATCAAGCAAATCGAGAGGGATTGTGAGTTCTTGGAATCTGAGGGTATAATGGATTACAGTCTTCTGGTTGGCCTTCACTTTCGTGATGATAATAATTATGACAAAATGGGGCTGTCGCCATATGTTTTGCGCACAGGAAATCGGGATTCTTATCAGATTGAAAAGTTCATGCGTGGGTATCGCTTTCTTGAAGCTGAGCTTCAAGATAGGGATCGAGTTTTATCCGGCCGGAAATCGTTGATTAGGTTAGGAGCCAATATGCCGGCAAGAGCTGAGCGAATGGCTCGGAGGAGTGATTTTGATCAATACACCATGGGTGGTATCAGTCATCTGACCCCTTATCGATGCGGAGAGACGTATGATGTGGTCCTGTATTTTGGGATTATTGACATTTTGCAAGATTATGATATTAGCAAGAAGTTGGAGCGAGCTTACAAATCCTTGCAGGTTGACTCGACTTCAATCTCTGCAGTTGATCCAAAGCTCTATTCAAAGAGATTCCGTGATTTCGTGGGGAGAGTTTTCACAGATGACATGTAA 2307 0.4742 MLEALVRDEPTDDLSSSKKGKSEADKINKDGQKPSPPVVVVARSRSQGGTRRVTPTGISIASDCSTSTVEKHLPNGDFYMGSFSGNVPHGSGKYLWTDGCMYEGQWKRGKAAGKGKFSWPSGATYEGEFKAGRMEGFGTFTGSDGDTYRGTWSADRKHGHGQKRYANGDFYEGSWKRNLQDGRGRYVWINGNEYVGEWKNGVISGRGVLVWANGNRYEGQWENGVPKGQGIFTWPDGSCYIGDWNKDMEIQQLNGTFYPGYGKENYLKSNGPLTGDNLTITMRKRSSVDGARRSMTEKNFPRICIWESDGEAGDITCDIIDNVEASMFYRDGKGLERDDIKQFRRNSWCCSREVKRPGQTIFKGHKNYDLMLNLQLGIRYSVGKEASISRELKPSDFDPKEKFWTRFPPEGSKITPPHQSVEFRWKDYCPMVFRQLRKLFQVDPGDYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVRKSEVKVLIRMLRSYYRHVSKYDNSLVTRFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRITDKPEREIDETTTLKDLDLNFVFRLQQNWYQDFIKQIERDCEFLESEGIMDYSLLVGLHFRDDNNYDKMGLSPYVLRTGNRDSYQIEKFMRGYRFLEAELQDRDRVLSGRKSLIRLGANMPARAERMARRSDFDQYTMGGISHLTPYRCGETYDVVLYFGIIDILQDYDISKKLERAYKSLQVDSTSISAVDPKLYSKRFRDFVGRVFTDDM 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0525 768 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 452 761 IPR002498 GO:0016307|GO:0046488
Prci15g0525 768 Gene3D - 81 131 - -
Prci15g0525 768 Gene3D - 223 270 - -
Prci15g0525 768 Gene3D - 178 222 - -
Prci15g0525 768 Gene3D - 132 177 - -
Prci15g0525 768 PIRSF PIP5K_plant 23 278 IPR017163 GO:0005524|GO:0016308
Prci15g0525 768 PIRSF PIP5K_plant 266 768 IPR017163 GO:0005524|GO:0016308
Prci15g0525 768 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 74 191 - -
Prci15g0525 768 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 353 534 IPR027484 -
Prci15g0525 768 SUPERFAMILY SAICAR synthase-like 363 764 - -
Prci15g0525 768 Gene3D - 535 764 - -
Prci15g0525 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 201 271 - -
Prci15g0525 768 Pfam MORN repeat 217 238 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 148 169 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 125 147 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 194 216 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 171 192 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 79 101 IPR003409 -
Prci15g0525 768 Pfam MORN repeat 102 123 IPR003409 -
Prci15g0525 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 109 153 - -
Prci15g0525 768 CDD PIPKc_AtPIP5K_like 367 763 - -
Prci15g0525 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 353 534 - -
Prci15g0525 768 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 364 764 IPR002498 GO:0016307|GO:0046488
Prci15g0525 768 MobiDBLite consensus disorder prediction 1 57 - -
Prci15g0525 768 FunFam Phosphatidylinositol 4-phosphate 5-kinase 154 200 - -
Prci15g0525 768 MobiDBLite consensus disorder prediction 1 30 - -
Prci15g0525 768 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 87 765 IPR023610 -
Prci15g0525 768 SMART PIPK_2 393 765 IPR002498 GO:0016307|GO:0046488
Prci15g0525 768 SMART morn 146 167 IPR003409 -
Prci15g0525 768 SMART morn 169 190 IPR003409 -
Prci15g0525 768 SMART morn 77 98 IPR003409 -
Prci15g0525 768 SMART morn 100 121 IPR003409 -
Prci15g0525 768 SMART morn 192 213 IPR003409 -
Prci15g0525 768 SMART morn 215 236 IPR003409 -
Prci15g0525 768 SMART morn 123 144 IPR003409 -
Prci15g0525 768 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 165 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0525 Prci-Chr15 3396038 3400814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0525 35 767 Acyl Lipid Metabolism Gene Families AT1G21980 74.523 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0525 K00889 - qsa:O6P43_015227 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0525 15 3396038 3400814 Prci2g0398 2 2826903 2829077 CCT
Prci15g0525 15 3396038 3400814 Prci15g0525 15 3396038 3400814 ECH