Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0518 ATGAGCAAACCCAGAACCCAGAGGAGAGACCCCAACCATGTCAGTCGAAAACAAAACCAGCTTCCCCAGAAAACAGAGAAACAAGCCTCTTGGGCGGTGATAAGAGGCCTCTTGCCTTGCAGAACTGTCCAAATTCAACAGCAGCAGCAGAAGCAGGCGGTAGTGAAACAACCAAAGAAGAAACAAGAGCAAAGGAAGCTGCAGGAAGAAGAAGAAGCCATCCCAGAAGAAAGCAGAGAGAAGTGCAAGAAAATGAGGTGTTCAGGTTCACTCTGTGATAACACCAAGGTCGTGGCAAGGCCTGAAACAGTGTCCCCTGACATCAACAAGATCAAAAGGGTGTCTCTGGGTGTCTGTAATACTGCCAACAACGATGCTTCTAATTCTAACAGATACTTGAAAGCTCCTCTGCATGAACTAAATGGGGTTGCCGTGTCTACCTCCACTTTCAACTCCCTGTCAGTATCTTCAAACTCGTCTGTGAGTGGGTCTCTCAGGGGAAAGCCGTTCAGGAGGTTCTCTGGTTGCTATGAGTGTCGAATGGTGGTTGACCCTCTTCTTCCTTTCACTCGAGACCCTTCTCTCAGGAGTAGCATTTACCCTTGCCCTCACTGTGGCGAGATCTTCATGAAGCCTGAAAATTTAGAGCTTCATCAGGCCGTCAAACATGCTGTATCTGAGCTGGGTCCAGAAGATACGAGCAAGAACATAGTGGAAATCATATTCCACTCGAGCTGGCTAAAGAAACAATCTCCAGTCTGCAAAATAGACCGCATCCTTAAAGTCCACAACACCCAGCGGACAATTACGAAATTCGAAGAGTACAGAGACTCCATCAAAGCCAGAGCCATAAAGCTCCCCAAGAAGCATCCTCGTTGCATAGCAGACGGGAACGAGCTGCTGAGGTTCCATTGCACGACCACTTTGTGCTCACTGGGCCTAAAAGGCTCCACCAACCTCTGTAACTCAATACCACAGTGCAGCGTGTGTGGCATAATCAAGAACGGCTTCAAGGTAGTCGCCGGCGGGAAGGGGATATTGACGACGGCGACAAGTGGGAAAGCACACGACAAAGCGGAGGTTTCAGGAGATGACAAAAATAACGAGAAAAGGGCAATGCTGGTATGTAGGGTGATAGCAGGAAGGGTAAAGAAGAATATAGAAGGAGGAATAATTAGCACGGAGGAGTATGATTCCATTGCAGGAGAAGTTGGGGCTTATTCCAATTTGGAAGAGTTGTATGTGTCGAATCCTAGAGCTATTTTGCCTTGCTTCGTTGTTTTCTACTCTGGTTTTTGA 1299 0.4765 MSKPRTQRRDPNHVSRKQNQLPQKTEKQASWAVIRGLLPCRTVQIQQQQQKQAVVKQPKKKQEQRKLQEEEEAIPEESREKCKKMRCSGSLCDNTKVVARPETVSPDINKIKRVSLGVCNTANNDASNSNRYLKAPLHELNGVAVSTSTFNSLSVSSNSSVSGSLRGKPFRRFSGCYECRMVVDPLLPFTRDPSLRSSIYPCPHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTITKFEEYRDSIKARAIKLPKKHPRCIADGNELLRFHCTTTLCSLGLKGSTNLCNSIPQCSVCGIIKNGFKVVAGGKGILTTATSGKAHDKAEVSGDDKNNEKRAMLVCRVIAGRVKKNIEGGIISTEEYDSIAGEVGAYSNLEELYVSNPRAILPCFVVFYSGF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0518 432 MobiDBLite consensus disorder prediction 56 79 - -
Prci15g0518 432 MobiDBLite consensus disorder prediction 1 15 - -
Prci15g0518 432 SMART c2h2final6 200 223 IPR013087 -
Prci15g0518 432 MobiDBLite consensus disorder prediction 50 79 - -
Prci15g0518 432 ProSitePatterns Zinc finger C2H2 type domain signature. 202 223 IPR013087 -
Prci15g0518 432 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 85 429 - -
Prci15g0518 432 SUPERFAMILY ADP-ribosylation 225 431 - -
Prci15g0518 432 Gene3D - 224 430 - -
Prci15g0518 432 ProSiteProfiles Zinc finger C2H2 type domain profile. 200 228 IPR013087 -
Prci15g0518 432 MobiDBLite consensus disorder prediction 1 28 - -
Prci15g0518 432 FunFam C2H2-like zinc finger protein 224 430 - -
Prci15g0518 432 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0518 Prci-Chr15 3353411 3355289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0518 165 429 C2H2 Transcription Factor Family AT1G75710 52.901 1.84e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci15g0518 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0518 - - qsa:O6P43_015222 577.015