Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0510 ATGTGTTACAGGATGCAGACATCGTCAGCATCATCAGATGGGAAGAAGAGGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTTTCAGAGATTAGAGCACCGAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACCCCGGAGGCTGCAGCCCGAGCCTACGATGCTGCACTTCTATGCCTCAAGGGTTCGTCAGCTAATCTCAACTTCCCTTCAAGTTCTTCACAATACATTCCTCAAGACAATGTCATGTCTCCTAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTTTCTGACAATGCCACAACCCCACCTTCTCCGCCCCCTGCCTCCGCCTCGACCTCCTCATCCTCACTCGTCTCGTCCCCATCAATGTCCTCCGATCAAATCGATGATGATGTCTCACTAATCTCATCATTTGGGGCCTACGCTAGTTATGATCAGACTAATGAACCAGTCTCTTTGATGGACTCTTGGTATAGCTTTGATGATTTGCAATCTCCCAAGTATGTGAATCAAATGCTCGGTGGTAATTTGTTTGATATTGATCCAACCCAGCTGCTCGATGATTTTTGCGAGGAAAGTGATATTCGTTTGTGGAGCTTCTGCTGA 630 0.4651 MCYRMQTSSASSDGKKRYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSQYIPQDNVMSPKSIQRVAAAAANSFSDNATTPPSPPPASASTSSSSLVSSPSMSSDQIDDDVSLISSFGAYASYDQTNEPVSLMDSWYSFDDLQSPKYVNQMLGGNLFDIDPTQLLDDFCEESDIRLWSFC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0510 209 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
Prci15g0510 209 FunFam ethylene-responsive transcription factor ERF014-like 16 76 - -
Prci15g0510 209 SMART rav1_2 17 80 IPR001471 GO:0003700|GO:0006355
Prci15g0510 209 MobiDBLite consensus disorder prediction 99 134 - -
Prci15g0510 209 MobiDBLite consensus disorder prediction 118 134 - -
Prci15g0510 209 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Prci15g0510 209 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Prci15g0510 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 151 - -
Prci15g0510 209 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Prci15g0510 209 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Prci15g0510 209 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Prci15g0510 209 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0510 Prci-Chr15 3239470 3240239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0510 18 208 AP2-EREBP Transcription Factor Family AT1G21910 54.187 7.86e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci15g0510 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0510 - - qsa:O6P43_015204 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0510 15 3239470 3240239 Prci15g0510 15 3239470 3240239 ECH