Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0499 ATGGACGGCTCTGCAGTGGAGCTTAGTCCAAACAATCTGGGCACGCCCAAGCGCCGGAATGCTCGGCGGAAGTTCGTTCAGTCGACGTTGTTCCCTCAGAAAGCTCAAGAGTCCAATGACAGAGCTGATGATCAACAAGAGGAAGAAGAAGCTCGCTGTTGTGCGAATGAGAACGGGACGGGAAGGCCCAAACAGAAAGTTACTCCTCGAACCAAGAATTCCAAGATAAAGGAGAAGCTGCCGCAGAATGCTACGTCAGAGAATATGGGCACACCCAAGCGCCGGAATGTTCGCCGGAAGTTGGTTCAGTCGACATTGTCCCCACAGAAAACCCAAGAGTCCAATGACAGAGCTGATGAACAGGAGGAGAACAATGTCGTTGATGATCAACAAGAGAAAGAAGAGGCACATTGTTGTGTGAATGAGAATGAGAAGGGAAATTCCAATCCAAAAGTTACTCCTCGATCCAAGAATCCCAAGAAAAAGGAGAAGCAGCTGCAAAACACTACACCAAAGAAACGGTCGCCCAAAGGGGTTAAGGGGTCAGGTTCACGGCAAATGTTGACCAATGTGGCACAGATTAGTATGGCGGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCAGCTGAGGAAAATTCAAGGATATTTGCTGGACGGCAAATGCATCCCTTTTTTTCTTCATGGAAGGTTGAGAAGAAACCTCAGGAGGCAGCTGAATCAGAACTCAGTTTATATGCAGCGAGGAGGAAGGATGAGCAAGTACTTGCCTGTGCCCCTATTCATGTATTTGAAAATAATCAGGATGTTGATGATACATCATTGCCCGACTGGAAAAACTGGACGTTTTTGGGGCAGACTGACAAAGCAAATTATGGTCCAGAAAGTTCATTTTCCTCTGTTTTTGAGGGTTCTATTGAACCCTTAAATATTGACAAGCTTCACAATACTTGTTATCCCTCTGGTGTTGCAGTTTCTCAAAATGTCCTGTCTTATTCAGATCAACATTCCATAGAATCTACGCAGCCTCAAGTAGAAAACTCAGCTTCACTGGATGGTGGGCAAACAAGTCTTCAACCACCAGAAGCCAAACTGGACATGAAAGCCAATACTGAGCAAGCTGGCATTTTCAGAAAGTCAGATCCTGAACCACAGAGTAGATTTCTTCAAGAAAGCATGAGGTCGTATTACCATAGTTGTGGAGATAAGGCTGAGGGAACCCTATGGACGCACAAGTACAAGCCAACAAAGGCCTTTGAGGTATGTGGTAATGATGAGTCCGTGAAATTTTTGCGTGACTGGTTACATCTCTGGCATGGAAGACGTTATCAAAGCAGGAAGGATGCCTCGTGCAGGGATAAAAGTGATATGCATGGTGGTGGTGGTGACGACGATGACTATGACTGTTCTCATTGTGACTATGATTCAGAAGACATGACTGAGGGGGACTCCCTGGAGAATGTTCTCTTAATTACTGGACCAATTGGGAGTGGCAAATCTGCGGCTATATATGCTTGTGCACAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATACATCAGACTGTCGAAATGGGACTGCTGTCAAGCAGCACTTTGGAGATGCTCTTGGATCGCTTGGGTTCAAAAGGTTATTGGAACACACGGATGGTTCACCAATGAAGAAAAAGAGGAAGCTGTCCTTAGGCCTAGCTTTGCCTAGTAACAAAGCATCTGATGAGTTAAATGAAGGGGTAATTGGACCAATAGCCATATCTGATGATGAAGTCTGCCCAGTTGCAACATCTTGTATGTTACCGGGCCAGAGAAACTTAATTGGATATGATAAAGTCCAAACATTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCCGAGACAGCAAAGGGGCCTATCATATTAACCTGCAATAGTTATAATCCTGCTCTGCCAGATAATTTTAGTAGACGTCATGTTTCTTTCTCATTGCCATCCACAAAGGAGTTGCTGTGTCATTTGTACATGGTTTGTGTTACGGAAGGAGTCAACATTGATCCTTTTGTACTGGAGAAATTTATACAATTTTGCGATGGAGATATCCGCAAAACTGTGATGCATCTTCAGTTCTGGTTCCAGAGTAAAAGATTAAGAAAAGACAAAAAAGCACAGAAATTGTATGGCTCGCTTCCATTTGACCTTGAGGTTGGCCATCAGATACTGCCCAAGATGATGCCCTGGGGTTTTCCCTCTCAGTTATCTGAACTAATTGAGAAGGAAGTTACCAGGGTAATAACCACAATGGAAGAAAACTCTAGTTTGCAGGGGTTAGTTGAGGAACAGCTTGACTTGAATGAAAAGCAAAGTGATTCGGATGTGAAGCAGGTGGGAACTGATTATATAGAGTCGAAGAAAGTAGAAATGCTTGAGAGGAATGGATCTGTTACAGACTACAGCCAATTGGAAGCTCAATTTCATGCTCTTTCTGAGATTTCAAATTCTTTTGGCACCCCGGTTGCACCTTCTAAAAGGAAGATTCAAAGGAAGCTTGTAGTGATGTCCTCTGGTTCTGAGGATGAGGATTTAAATAATGGGCACCCTCTTGACATGTGTGATGATGCCGACAATGGACCAGCTCTTGTGGACAACAGTGATACTCCATCAAAACTTCCAATGAATAAAAAATACACCAGCGTATCATTTTTTAAGCGGGGTGCTGGATTGGAGGAGTCTGAGGTAGACCTGAACAAACATTTAAGAACAGCTGACGTTATGTGTTCAAGTGAAACATCCAAGTCACTTGATGTATCCTGTGTTCCGGAATCAACTTTTGTTCCTGAGACTCTTGATGAAATAGAAACTATCTCTGGAGCAGTGTCTTGTGGCAATGGTGATGGTCCTTTGGAAGTCTCTGTGAATAATGAGTTACCACCATTCACTTTCAGTGTTCGCAAGCGCTTAGCCAAGCGAGTGCTGGATGATGATTTGTTGGGAAGTACCAAAATACCAGAATCTTCTCAAAAAGAGATTGTGCAAGATTTGATAGATGAAAATATGGAACCTTCACCCGTGTATGATGTGATGGATGAATGCAGTCGAGTGGATTTCAAAATGAAGTCCAATTTTGTCGAACCCTTTCCATCAATGGGGACTGATGTAATACATAAGATCTGGAGAGAACTGCGTGAATGTCGAGCAGATTTAAGACAGCATGCTGCCACTGAACAGCCAGGTGCTTTTGAAGTCGTTAAACTGGCTTGTGGTATCAGCAATCTAATTTCAGAGGCTGACTTGCTGTTTGGTAACTTAAAACAAAAAGAATGTATATGGGATTGA 3345 0.435 MDGSAVELSPNNLGTPKRRNARRKFVQSTLFPQKAQESNDRADDQQEEEEARCCANENGTGRPKQKVTPRTKNSKIKEKLPQNATSENMGTPKRRNVRRKLVQSTLSPQKTQESNDRADEQEENNVVDDQQEKEEAHCCVNENEKGNSNPKVTPRSKNPKKKEKQLQNTTPKKRSPKGVKGSGSRQMLTNVAQISMAVPDLRLEAKLSAEENSRIFAGRQMHPFFSSWKVEKKPQEAAESELSLYAARRKDEQVLACAPIHVFENNQDVDDTSLPDWKNWTFLGQTDKANYGPESSFSSVFEGSIEPLNIDKLHNTCYPSGVAVSQNVLSYSDQHSIESTQPQVENSASLDGGQTSLQPPEAKLDMKANTEQAGIFRKSDPEPQSRFLQESMRSYYHSCGDKAEGTLWTHKYKPTKAFEVCGNDESVKFLRDWLHLWHGRRYQSRKDASCRDKSDMHGGGGDDDDYDCSHCDYDSEDMTEGDSLENVLLITGPIGSGKSAAIYACAQEEGFEVLELNTSDCRNGTAVKQHFGDALGSLGFKRLLEHTDGSPMKKKRKLSLGLALPSNKASDELNEGVIGPIAISDDEVCPVATSCMLPGQRNLIGYDKVQTLILVEDVDILFPEDRGCIAAIQQIAETAKGPIILTCNSYNPALPDNFSRRHVSFSLPSTKELLCHLYMVCVTEGVNIDPFVLEKFIQFCDGDIRKTVMHLQFWFQSKRLRKDKKAQKLYGSLPFDLEVGHQILPKMMPWGFPSQLSELIEKEVTRVITTMEENSSLQGLVEEQLDLNEKQSDSDVKQVGTDYIESKKVEMLERNGSVTDYSQLEAQFHALSEISNSFGTPVAPSKRKIQRKLVVMSSGSEDEDLNNGHPLDMCDDADNGPALVDNSDTPSKLPMNKKYTSVSFFKRGAGLEESEVDLNKHLRTADVMCSSETSKSLDVSCVPESTFVPETLDEIETISGAVSCGNGDGPLEVSVNNELPPFTFSVRKRLAKRVLDDDLLGSTKIPESSQKEIVQDLIDENMEPSPVYDVMDECSRVDFKMKSNFVEPFPSMGTDVIHKIWRELRECRADLRQHAATEQPGAFEVVKLACGISNLISEADLLFGNLKQKECIWD 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0499 1114 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 83 1108 IPR004582 GO:0006281
Prci15g0499 1114 MobiDBLite consensus disorder prediction 1 186 - -
Prci15g0499 1114 MobiDBLite consensus disorder prediction 335 360 - -
Prci15g0499 1114 Gene3D - 406 666 IPR027417 -
Prci15g0499 1114 MobiDBLite consensus disorder prediction 335 356 - -
Prci15g0499 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 716 IPR027417 -
Prci15g0499 1114 MobiDBLite consensus disorder prediction 37 55 - -
Prci15g0499 1114 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 670 731 - -
Prci15g0499 1114 Gene3D - 668 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0499 Prci-Chr15 3135296 3144006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0499 408 713 Core DNA Replication Machinery Family AT5G22010 22.857 1.08e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0499 K26118 - gmx:100784209 1058.51