Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0487 ATGGCAGGTTTCAGCGGTGACGAAACTGCTCCATTCTTCGGCTTCCTTGGAGCCGCTGCTGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTACGGAACGGCAAAGAGTGGAGTAGGCGTGGCCTCCATGGGAGTCATGAGGCCAGAGCTCGTCATGAAATCCATTGTCCCAGTGGTAATGGCTGGAGTGCTGGGTATTTATGGATTAATCATAGCTGTTATTATTAGTACAGGAATTAACCCGAAAGCAAAATCTTACTATCTCTTCGATGGGTATGCCCATTTATCGTCCGGCCTTGCCTGTGGCCTTGCCGGACTTTCTGCTGGGATGGCAATTGGAATTGTTGGGGATGCTGGAGTTCGTGCAACTGGGTTTTGCTGGAATAGCACTTGA 393 0.5089 MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRATGFCWNST 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0487 130 SUPERFAMILY F1F0 ATP synthase subunit C 12 76 IPR035921 -
Prci15g0487 130 SUPERFAMILY F1F0 ATP synthase subunit C 86 123 IPR035921 -
Prci15g0487 130 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 123 - -
Prci15g0487 130 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Prci15g0487 130 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Prci15g0487 130 FunFam V-type proton ATPase proteolipid subunit 10 128 - -
Prci15g0487 130 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Prci15g0487 130 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 130 IPR000245 GO:0033179|GO:0046961|GO:1902600
Prci15g0487 130 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Prci15g0487 130 Gene3D - 10 125 IPR035921 -
Prci15g0487 130 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0487 Prci-Chr15 3057241 3059605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0487 1 123 Primary Pumps ATPases(2) AT2G16510 97.561 3.13e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0487 K02155 - qsa:O6P43_002049 217.624