Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0482 ATGGCGGTTGAATCGGAGGCTGTGGCGGTGGGTAGAGGAAAGCAAAAGGAAGAGCAAAAGCATTTTCACGTGCTGGCAGTGGATGACAGTGTCATCGACAGGAAGCTTTTAGAGAGGCTCCTTACAGTTTCTTCATGCAAAGTGACCTGTGTGGACTCTGGGGATAAAGCTCTGAAGTTCCTTGGTCTGCTTGATGACCTTCAGAATATCAGTGCTTCCTCCACTTCCCTTTCACCTTCGTCGTCTTCTCCTGATCAATCGCCCCAGCATGAGGGTGCAAAAGTTAACATGATCATGACAGACTACTGCATGCCTGGGATGAGTGGTTATGATTTGCTTAAACGAGTCAAGGGATCTCCTTGGAAAGATATACCCGTCGTCATCATGTCATCAGAAAATGTGCCTTCAAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAGGAATTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTGCAGCCATACTTTCTGAAATTCCCCGACAACTCATGCCTAGCAGAATCCATAGCCACGGACAATGACAGCAATCAGAAGGATAACTGTAATAATATTAGCAAAAGGAAGGCGACGTCACCGGAACCTAGGGAAAGATCGAGATCCAAAATGAAAGAATTAAAGGTGGTGTGA 657 0.4581 MAVESEAVAVGRGKQKEEQKHFHVLAVDDSVIDRKLLERLLTVSSCKVTCVDSGDKALKFLGLLDDLQNISASSTSLSPSSSSPDQSPQHEGAKVNMIMTDYCMPGMSGYDLLKRVKGSPWKDIPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLKKLQPYFLKFPDNSCLAESIATDNDSNQKDNCNNISKRKATSPEPRERSRSKMKELKVV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0482 218 Gene3D - 9 167 - -
Prci15g0482 218 CDD REC_typeA_ARR 24 162 - -
Prci15g0482 218 SUPERFAMILY CheY-like 22 162 IPR011006 -
Prci15g0482 218 Pfam Response regulator receiver domain 91 161 IPR001789 GO:0000160
Prci15g0482 218 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 197 IPR045279 GO:0009736
Prci15g0482 218 SMART REC_2 22 163 IPR001789 GO:0000160
Prci15g0482 218 ProSiteProfiles Response regulatory domain profile. 23 167 IPR001789 GO:0000160
Prci15g0482 218 MobiDBLite consensus disorder prediction 199 218 - -
Prci15g0482 218 MobiDBLite consensus disorder prediction 180 218 - -
Prci15g0482 218 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0482 Prci-Chr15 3029998 3032466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0482 19 168 Response Regulator Gene Family AT3G57040 61.184 8.31e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci15g0482 Response_reg 6.3e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0482 K14492 - gmx:100801334 277.33