Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0478 ATGTGCAAACTGCATATATTGTGTGCCTATTTAAAGTGGAAGATTCTAATGTTTTGTGAAGATTCCAGAAGACTTGATCGTTCTATTGCTCTGACATTCACAAGAAATATCGAAGCATGTAGTGATTTTTGCGACACTGGGATATATTTTCGCATCTCAATTTTTATTGCAATGTTGAAAAATTCATGTACAGTCTCACTGAGAGAACTGAAACATTGGATGAAGCCGGAGAAGGTCAAAACTTCAATCACGACTTTTCCTTCTTCAGCAGAAATAGTGTCTGAACCTCTGGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTGGTCCTTAAACCATCAGAAATTGCTCCAGCCACATCGTCGCTGCTGGCAAAATTGTTAGGGGAGTACATGGATAACACATCTATAAAGGTTGTAGAGGGGGCAGTTGATGAGACATCTGCTCTGCTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTGATGGCCGCTGCTGCAAAACATCTTACGCCAGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGTTGTTGTTGATTCAGATATCAATTTACAAGTTGCAGCTAGACGGATAATTGCAGGCAAGTGGGGGTGCAACAATGGACAAGCCTGCATTTCTCCGGATTACATTCTAACAACAAAAGACTTTGCCCCAAAGTTGATTGATGCCCTAAGGACTGAATTGGAGAAATTTTATGGAGAAAACCCATTAGAATCGAAAGATTTGTCCCGCATCGTGAATTCAAATCACTTTGCTCGCTTGACAAAGCTCTTGGAAGATGACAAGGTTGCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGTTCCCACTATTTTATTGGACGTTCCTCGAAATTCTCTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAGTAAATTAGAAGAAAGTTTCGATGTGATTAATTCAGGAGCAAAACCCCTCGCTGCATATTTATTTACCAACAAGAAGAAACTCAGGGAGCAGTTTGTGATGAACGTATCTGCAGGGGGTTTGGTTGTCAACGACACTACCGTACATCTCGCCACCTGTACTCTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTTCATACCATGGGAAATTCTCGTTTGAAGCCTTTAGCCACAAAAAAGCGGTTTTGTATCGCGGTTTCATGGGAGATGCATCAGTGAGGTACCCTCCGTACACAAACACGAAGCTCAGATTGCTCAAGGCTTTGATTGGCGGTAGTATACTCGGTATAATCCGTGCCATTTTTGGATGGTCTTAG 1407 0.4229 MCKLHILCAYLKWKILMFCEDSRRLDRSIALTFTRNIEACSDFCDTGIYFRISIFIAMLKNSCTVSLRELKHWMKPEKVKTSITTFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNTSIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSDINLQVAARRIIAGKWGCNNGQACISPDYILTTKDFAPKLIDALRTELEKFYGENPLESKDLSRIVNSNHFARLTKLLEDDKVAGKIVYGGEKDESKLRIVPTILLDVPRNSLIMKEEIFGPLLPIITVSKLEESFDVINSGAKPLAAYLFTNKKKLREQFVMNVSAGGLVVNDTTVHLATCTLPFGGVGESGMGSYHGKFSFEAFSHKKAVLYRGFMGDASVRYPPYTNTKLRLLKALIGGSILGIIRAIFGWS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0478 468 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 423 IPR016162 GO:0016491
Prci15g0478 468 FunFam Aldehyde dehydrogenase 205 405 - -
Prci15g0478 468 FunFam Aldehyde dehydrogenase 49 208 - -
Prci15g0478 468 PANTHER ALDEHYDE DEHYDROGENASE 56 458 IPR012394 GO:0006081
Prci15g0478 468 SUPERFAMILY ALDH-like 58 441 IPR016161 GO:0016491
Prci15g0478 468 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 205 405 IPR016163 GO:0016620
Prci15g0478 468 PIRSF ALDH 41 462 IPR012394 GO:0006081
Prci15g0478 468 Pfam Aldehyde dehydrogenase family 87 425 IPR015590 GO:0016491
Prci15g0478 468 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 201 208 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0478 Prci-Chr15 3005509 3010180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0478 48 466 Aldehyde Dehydrogenase Gene Family AT1G44170 71.838 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0478 K00128 - gmx:100778722 725.702