Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0476 ATGAGCGAGAATCCCGGGCTGGATTCGGAAGAGGCGTCGGCGATGGTGTGCCGACTGAGAGCTGCCTTTGATTCTGGCGTCACTCGGAGTTATCGGTGGAGAGCTTCCCAGCTGGAGGCTATCATCACTTTGACTGATCAAAACCAGCACCGCATCGTTCAGGCTCTTCACTCCGACCTCTCCAAACCCGAAACTGAAGCCTTCATCCACGAGATTGCAATGTTGAAAAATTCATGTACAGTCTCACTGAGAGAACTGAAACATTGGATGAAGCCGGAGAAGGTCAAAACTTCAATCACGACTTTTCCTTCTTCAGCAGAAATAGTGTCTGAACCTCTGGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTGGTCCTTAAACCATCAGAAATTGCTCCAGCCACATCGTCGCTGCTGGCAAAATTGTTAGGGGAGTACATGGATAACACATCTATAAAGGTTGTAGAGGGGGCAGTTGATGAGACATCTGCTCTGCTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTGATGGCCGCTGCTGCAAAACATCTTACGCCAGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGTTGTTGTTGATTCAGATATCAATTTACAAGTTGCAGCTAGACGGATAATTGCAGGCAAGTGGGGGTGCAACAATGGACAAGCCTGCATTTCTCCGGATTACATTCTAACAACAAAAGACTTTGCCCCAAAGTTGATTGATGCCCTAAGGACTGAATTGGAGAAATTTTATGGAGAAAACCCATTAGAATCGAAAGATTTGTCCCGCATCGTGAATTCAAATCACTTTGCTCGCTTGACAAAGCTCTTGGAAGATGACAAGGTTGCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGTTCCCACTATTTTATTGGACGTTCCTCGAAATTCTCTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAGTAAATTAGAAGAAAGTTTCGATGTGATTAATTCAGGAGCAAAACCCCTCGCTGCATATTTATTTACCAACAAGAAGAAACTCAGGGAGCAGTTTGTGATGAACGTATCTGCAGGGGGTTTGGTTGTCAACGACACTACCGTACATCTCGCCACCTGTACTCTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTTCATACCATGGGAAATTCTCGTTTGAAGCCTTTAGCCACAAAAAAGCGGTTTTGTATCGCGGTTTCATGGGAGATGCATCAGTGAGGTACCCTCCGTACACAAACACGAAGCTCAGATTGCTCAAGGCTTTGATTGGCGGTAGTATACTCGGTATAATCCGTGCCATTTTTGGATGGTCTTAG 1455 0.4515 MSENPGLDSEEASAMVCRLRAAFDSGVTRSYRWRASQLEAIITLTDQNQHRIVQALHSDLSKPETEAFIHEIAMLKNSCTVSLRELKHWMKPEKVKTSITTFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNTSIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSDINLQVAARRIIAGKWGCNNGQACISPDYILTTKDFAPKLIDALRTELEKFYGENPLESKDLSRIVNSNHFARLTKLLEDDKVAGKIVYGGEKDESKLRIVPTILLDVPRNSLIMKEEIFGPLLPIITVSKLEESFDVINSGAKPLAAYLFTNKKKLREQFVMNVSAGGLVVNDTTVHLATCTLPFGGVGESGMGSYHGKFSFEAFSHKKAVLYRGFMGDASVRYPPYTNTKLRLLKALIGGSILGIIRAIFGWS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0476 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Prci15g0476 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Prci15g0476 484 FunFam Aldehyde dehydrogenase 20 224 - -
Prci15g0476 484 PIRSF ALDH 3 478 IPR012394 GO:0006081
Prci15g0476 484 PANTHER ALDEHYDE DEHYDROGENASE 10 474 IPR012394 GO:0006081
Prci15g0476 484 SUPERFAMILY ALDH-like 12 457 IPR016161 GO:0016491
Prci15g0476 484 FunFam Aldehyde dehydrogenase 221 421 - -
Prci15g0476 484 CDD ALDH_F3FHI 12 443 - -
Prci15g0476 484 Pfam Aldehyde dehydrogenase family 5 441 IPR015590 GO:0016491
Prci15g0476 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0476 Prci-Chr15 3005509 3016820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0476 10 484 Aldehyde Dehydrogenase Gene Family AT4G34240 67.789 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0476 K00128 - gmx:100778722 778.859